Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01613 ATGCCAGACGTTCAAGCCCTTGTTAATGAATTTGTGAATCTGCTCAAGAAGCGTAAAATTGAAGGGTCTCAGGCCACAGCGAAGCAGACAGCAGAGTTGCTCCGGTCAGTGATTTCGCATCAGCGGGTGCCACACACAAACCAGGCCACATCTCTGATTAATTCAGTAAGGGCTGTGGGGGAGAAGATTATTGATGCTAATCCTATTGGGTTTGGTCTTGAAGTTCATGTATACGGAAAAACATTTATTGAGAGAGATAAACACCTTAAACGGATATGTACCATTAGGGGGACTAGTCTCTGGTTCTTGGCTGGTACCCTGGAGTTATCTGTGGGAAATATCGTAAGGCGGGTTCTTCACATTATAAGGGAGGAGGATCTTTCCCTTGTTACAGATGCTTTGGCTGGTTCTGGAAGTGATGATGAAGATGATGTCGAGCGAGATGATCATCCTGCGTTATCTGCTGCTGCTGTTGCAGCTGCTGCAAGAAGCACCTTGCGTCCACCCTCATTACAAACTCTTCTAGAGGATGTGACCGATTCAGCTGCCGTTCCACCAACTCCTTCCTCGACGGGTGACTCTGATGGGAAAAGTAGATCTATTGAAAAGGGTACAAGAGGTCGGAAGTTGAAGCATGATGTCATTGAAGCAGTCAATGAACTTATTCAAGACATAACCTCTTGCCATGAACAAATAGCAGAACAAGCAGTAGAGCATATTCATCAAAATGAGGTAATATTGACGCTAGGCAGTTCTAAAACAGTGTTCGAATTTCTTTGTGCTGCAAAGGAGAAAAAGAGATCATTTAAGGTTTTTGTTGCTGAAGGTGCCCCGAGGTATCGGGGACATCTCCTTGCGAAAGAATTGGCTGCTAGAGGCTTACAGACCACAGTAATTGCTGATTCTGCAAGTTTTGCTATGATTTCCAGAGTGAATATGGTTATAGTTGGTGCTCATGCCGTCATGTCTAATGGTGGAGTAATTGTCCCAATTGGGTTGCATATGGTTGCACTTGCAGCTCGTAGGCATGCTGTTCCTTTTGTTGTACTTGCTGGAAGTCATAAGTTGTGCCCTCTGTATCCTCACAATCCTCATCTCCTATTGAATGAATTGAGATCCCCATCCGAGCTACTAGACTTTGGAGAATTCTCAGATTTGATGGATTCTGCAACTGCTGTTGGTTCTCTTCATGTTGTTAATCCAGCATTTGATTATGTGCCACCAGACCTTGTTAGTCTCTTCATTACTGGCACTGGAGGGCATAACCCATCATATATGTACCGGCTAATAGCTGATTATTACTCTGCCGCTGATTTGGTGTTGAAACAGAGACCTATTACAGGGAATTGA 1350 0.4422 MPDVQALVNEFVNLLKKRKIEGSQATAKQTAELLRSVISHQRVPHTNQATSLINSVRAVGEKIIDANPIGFGLEVHVYGKTFIERDKHLKRICTIRGTSLWFLAGTLELSVGNIVRRVLHIIREEDLSLVTDALAGSGSDDEDDVERDDHPALSAAAVAAAARSTLRPPSLQTLLEDVTDSAAVPPTPSSTGDSDGKSRSIEKGTRGRKLKHDVIEAVNELIQDITSCHEQIAEQAVEHIHQNEVILTLGSSKTVFEFLCAAKEKKRSFKVFVAEGAPRYRGHLLAKELAARGLQTTVIADSASFAMISRVNMVIVGAHAVMSNGGVIVPIGLHMVALAARRHAVPFVVLAGSHKLCPLYPHNPHLLLNELRSPSELLDFGEFSDLMDSATAVGSLHVVNPAFDYVPPDLVSLFITGTGGHNPSYMYRLIADYYSAADLVLKQRPITGN 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01613 449 MobiDBLite consensus disorder prediction 178 208 - -
Vian11g01613 449 FunFam translation initiation factor eIF-2B subunit beta 228 434 - -
Vian11g01613 449 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 2 69 - -
Vian11g01613 449 MobiDBLite consensus disorder prediction 178 195 - -
Vian11g01613 449 Pfam Initiation factor 2 subunit family 200 423 IPR000649 GO:0044237
Vian11g01613 449 SUPERFAMILY NagB/RpiA/CoA transferase-like 107 438 IPR037171 -
Vian11g01613 449 Gene3D - 228 433 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01613 Vian-Chr11 26715361 26722074 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01613 1 441 Eukaryotic Initiation Factors Gene Family AT3G07300 69.351 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01613 K03754 - gmx:100807877 655.595