Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01609 ATGGGAAAAGATTTGAGGAAGAGTGAGATGAAAAAACAGCAAGGGAAGTGGAAGATTTTGTTAAGAAGGACCGCAGAAAAGATTAGACAATTTGATGCGTCAAGCTGGGAACAGGTATTGTGCCGATTGTGGATCATTAGAGCCAAAATGGGTCTAGATGAATGGACAGATGAACAAGTTGATGAATTGGTGAAATTGGGTGGAAATACAGTAGTGAACAAGAAGTATGAAGCTTACCTGCCAAGTAACATAAGAAAACCAAAACCTAATTCTTCCATTGAAGAACGCTCTGAATTCATTAGGAGAAAATATGAGTTTATGCAGTTTTTGGATGCTGAGGAGAACATGTCTTGCCCTTTCATACCATCCAATTCAGGAAGTTCATCAGATTCTCAGATTGGTTCCTCAAGACTTCAGTCCATACGAGAAAAAAAGCAGCATTCTTCTGATAATAAACAACAAACTAAACATCGTATTTGCAGAACATTTCGAAACAGTCGAGGAAGAAAAGAAACTCATGACTTTAGGACTTCAAAGAATAGCACATCATTGGCAGGTATGACTGAATTTGTTGGGTTGATAAAGGTGAATGTGGTTAAAGGAATTAATCTTGCTGTTCGTGATGTAATGAGTAGTGATCCTTATGTGATCATATCCCTTGGTCACCAATCAGTGAAGACTCGTGTCATAAAGAACAATTTAAACCCAATTTGGAATGAAAGCCTAATGTTGTCAATTCCTGATAATATTCCTCCTCTTAAAATTATTGTGTATGATAAAGATACTTTCTCCACTGATGATTTTATGGGTGAGGCTGAAATAGACATTCAACCTTTGGTCTCAGCTGCAACAGAATATGAAAAATCTTCAGACGATAACATCGTGCAGATTGAAAAAATGGTAGCAAGTAGTGACAACACTCTTATTAAGGATAGCATAATCTCCCTTGAAGATGACAAAATCAAACAACAGGTCTCAGTAAGACTCCAACATGTTGAGAGAGGTGTGTTAGAGATTGAACTTGAATGTGTTCCTTTAACTCAGTAA 1047 0.3706 MGKDLRKSEMKKQQGKWKILLRRTAEKIRQFDASSWEQVLCRLWIIRAKMGLDEWTDEQVDELVKLGGNTVVNKKYEAYLPSNIRKPKPNSSIEERSEFIRRKYEFMQFLDAEENMSCPFIPSNSGSSSDSQIGSSRLQSIREKKQHSSDNKQQTKHRICRTFRNSRGRKETHDFRTSKNSTSLAGMTEFVGLIKVNVVKGINLAVRDVMSSDPYVIISLGHQSVKTRVIKNNLNPIWNESLMLSIPDNIPPLKIIVYDKDTFSTDDFMGEAEIDIQPLVSAATEYEKSSDDNIVQIEKMVASSDNTLIKDSIISLEDDKIKQQVSVRLQHVERGVLEIELECVPLTQ 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01609 348 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 190 284 IPR035892 -
Vian11g01609 348 MobiDBLite consensus disorder prediction 120 139 - -
Vian11g01609 348 Pfam Putative GTPase activating protein for Arf 50 111 IPR001164 GO:0005096
Vian11g01609 348 Gene3D C2 domain 190 347 IPR035892 -
Vian11g01609 348 ProSiteProfiles C2 domain profile. 169 290 IPR000008 -
Vian11g01609 348 SMART C2_3c 193 288 IPR000008 -
Vian11g01609 348 Gene3D Arf GTPase activating protein 46 118 IPR038508 -
Vian11g01609 348 MobiDBLite consensus disorder prediction 120 179 - -
Vian11g01609 348 CDD C2_ArfGAP 191 335 - -
Vian11g01609 348 SUPERFAMILY ArfGap/RecO-like zinc finger 51 110 IPR037278 -
Vian11g01609 348 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 50 348 IPR044518 GO:0005096|GO:0005543
Vian11g01609 348 MobiDBLite consensus disorder prediction 140 157 - -
Vian11g01609 348 Pfam C2 domain 193 281 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01609 Vian-Chr11 26646046 26653044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01609 52 348 C2H2 Transcription Factor Family AT4G21160 43.144 5.56e-82 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01609 K12486 - gmx:100799376 423.705