Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian11g01603 | ATGCCAAAATGCATTAATAATTGCCACAACTTGGAAGGCTTCTGGAAAAATTGGCACGCTTCCTTCAACAAGTGGCTTGTGAGGTATATTTACATTCCTCTTGGGGGATCTAAGAAAAAGCTACTAAATGTGTGGGTTATATTCACATTTGTTGCAATCTGGCATGATTTAGAGTGGAAGCTTCTTTCATGGGCATGGTTGACGTGTATATTCTTCATCCCTGAGCTCAAAGTTCTTTTGGAGTATGCATATTTCGTGAACTCAGTGCTGTTGCTGGGGCAATCACAATTACTTGCCTCATGCATTAACGTTGAGCTCAAGCTCCATGCTATGGTCACTCGCAAGTGCGCGAAAGTTGACGCACGCGTGGTGTGCGTCGAGTCGCCTAGGGTTGTGTTGCTGGTTGACGTGTATCTTCCTATTCAAGTGTGGAGTGGCTGGCAGTTCCCGCGGTCGGGGGCAGTTGCCGCCGCCATTTTTCGCCATTTGAGCTGTGATTGGGATGAGCGAAGTTCAATGCTTTCATATCCAGACTATTGTAGGAAGACTCATGGAGCAAATGAGAGTAATTGGAACCTTTCTGATTGTCATGTACTTTGTTGCAAGCTCCATCCCCATGTTAGCAGTTCTTCAAGGAAAAGCCTATTTGAACTTCATGAACTTTTCAAGACACTACCTGGCGTAGGAAAACAACGGATGTTTAATAGCTCCAAAATAATTCCTATGGATCACTCATGCAGATGGGGCATTTGGGAGTTATCTGATGATATTTTAACAAAAATTTTATCTTCCCTGGACCCAATGGACCTCACTAGGGTTTCTGAAACGTGTCATCATCTAAGATCATTGGCTGCTTCTGTAATGCCTTGTACAAAGTTAAATCTGTTTCCTCATCAGCTGACAGCTGTTGAGTGGATGTTGCATCGTGAGCGAAATGCTGAGCTTTCGCCACACCCTTTATATGCATTTCTCTCAACTGAAGATGGTTTTAATTTCCATGTAAATACCGTTTCTGGTGAAATTGTCACTGGGGAAGCTCCCACCATCAGGGATTTTCGAGGAGGAATGTTTTGTGATGAACCTGGTTTGGGTAAGACTGTAACTGCACTCTCTCTTATTATGAAGACACGAGGTACATTGGCAGATCCACCAGATGAGGCACAAGTTGTCTGGTGTCAACATAATGGTAATCAGAAATGTGGTTATTATGAGATCAGTGGTAATAACATAACTGGTTGTTCTGCATTGGGTAAAAGGAACGTGAGCCAATATATCAGTAGAACTAATGATAACCATGAATACTCCTCCAAAAAAGCCAGAATGTCAAATCCTGACCAACACATGATTAAACTTCAGAGTTCATGTTCCATGGAAGTAAACAAATCACCTGTGGAGGCACGGTTTAAGGAATCTATGCATTCAAATCAGTATACTAGGAGTTTGAGCCGTATAAAGAAAAATCTATGCTTCACAAACGAAGAGGAAGCTATAATATCCAAGGAAAGAGAAACTGAAGGATTAATTAAAGCAAATCATGCCTCAGATGTTACACCTCATTTATCTCAAAAGAAGCTGCCTGGGAAGCCTGAAGGTGATCCTTTTGAGTACAGTGATACATGGATTCAGTGTGATGCTTGTCACAAGTGGCGAAAGCTGGCAGACAATAGTATGGCTAGTTCTAGTGCAGCATGGTTTTGTAGTATGAACCCTGACCCTCTTTATCAAAGTTGTAGTGTCCCTGAACAACATTTTCGTTCTACATCTAGGATAACATACTTGCCAGGGTTTCACTTAAAAGGAACTCATGGTGGTGACAGACAAAATGTTTCTTTTTTCACCAGCGTGCTTAAGGAGCACTACTCACTGATAAATTCTCAGACGAAAAAAGCCCTGGCCTGGTTGGCTAAAATTTCAACAGACAAGCTAGCAGCTATGGAAACAAATGGAATAAGAGGTCCTATTTTAAACACGTGTACTGCATCTGGCAGACATTTTAATGCCTTCCACAAAGTATTTCAAGCATTTGGCCTCTTAAAGAGAGTAGACAAAGGTGTGTGCAAGTGGTTCTATCCTCAACATCTTAACAATTTGACTTTTGATGTGGCTGCCCTTGGCATGGCACTCCGTGAGCCTATAGATTTTGTTAGGTTATACTTGTCAAGGGCTACCCTGGTAGTTGTTCCAGCAAACTTGGTTGATCATTGGAAAACACAAATAGAAAAGCATGTGAGGCCTGGTCAATTGCGGATTTATGTTTGGACTGATCACAGGAAGCCATCTGTGCATTGTCTTGCATGGGATTACGACATTGTCATAACCACTTTTAGTCGTCTGAGTGCTGAGTGGGGCCCTCGTAAGAGGAGTGTTTTGATGCAAGTACATTGGTTTCGGGTAATTTTAGATGAGGGGCACACTCTTGGGTCTAGCCTAAACTTAACAAACAAGTTGCAAATGGCCATTTCATTGATAGCTTCTAATCGATGGATACTAACAGGAACTCCTACACCTAACACTCCTAACAGCCAACTTCCACATCTGCAAACATTGCTAAGGTTCCTTCATGAAGAATCTTATGGACTGAATCAAAAGTCATGGGAAGCTGGTGTGCTCAGGCCATTTGAAGCAGAAATGGAGGAAGGAAGGTCTCGTCTGTTAGATCTGCTTCACAAATGCATGATTAGTGCTAGAAAGACAGATTTACAAAGCATCCCACCATGCATCAAGAAAGTTGTTTATCTGGATTTTAATGAGGAGCATGCTAGAAGTTACAATGAATTGGTAATCACTGTAAGGCGTAATATATTGATGGCTGATTGGAATGATCCCTCACATGTTGAGAGTCTACTGAATCCAAAGCAGTGGAAGTTTCGTAGGGCAACTATAAAAAATGTCAGGCTTTCGTGCTGTGTTGCTGGACATATTAAGGTTACACATGCTGGTGAAGATATTCAAGAAACAATGGATATGTTAGTACAAAGTGGTCTGGATCCTACTTCTGGAGAGTATACCTCCATAAGATGTAATCTCTTGTATGGTGGTCACTGTGTCAGGTGCAAGGAATGGTGCCGCCTTCCGGTCATTACACCATGTCGGCATTTGTTGTGCCTTGATTGTGTTTCTATTGACCATACGAAGTGTACTTGTCCTGGCTGCAGTAAATTGTATGAGATGCAAAGTAGACTTCCCCGACCTGAAAATCCTAATCCAAAGTGGCCTGTACCCAAAGATCTTATTGAGCTACAACCGTCGTATAAGCAGGCATGCATATACATGTCATCGAACAGCAGTTGTATGGCGCTTCTAATGGATGGAACCATGGCGATGCATAAAGAGCAAGTAATTAGTCGTGCTCATCGAATGGGTGCTTCTCGTCCTATTCATGTTGAAACACTAGCAATGCATGGTACAATTGAAGAGCAAATGCTAGGCTTTTTACAGGTGAATCTCTATAAATTCAAGCAGATAAGCCAGTTTCTGTTGGCCATGTCTGTTGAAGAGCAAAAATGCTTAGAGGGCATGATAAAAAATGTGGCAGAGACAGGGCCATTGCCTCTAGGGAAAAAGTTATCTATTGAAACTAAGATCTGTGAAACAAAAGGTAACATGAGTTATATGATGAATTTTTCGGTAGCTATAAGCTTTTATTTAATTAGAATTAACAATGTATTTAACGTGGAAACCATTCTTTTTAGGATTGAGTCCAATTATATAATTTCTAGTTTAATTCTTGATGGTTTTATTAGGAATGTTCACCTATCTAATCTCGCTGTGGATGACACTCTTGAAGAACAAACCTCTTACATATTTGGAAGTCTCGTAGAGTTAGATATGATAGTTCAGATGGCAATAGTTTCTATATTCCACCTTGGTCGAGCGACCCATCCTAACCTACTAGATATATCAGATGGTCAGTTAGAATGTTGGTTGAGGGATATAATGCGATGTTTATATTGCATGTAG | 3960 | 0.4119 | MPKCINNCHNLEGFWKNWHASFNKWLVRYIYIPLGGSKKKLLNVWVIFTFVAIWHDLEWKLLSWAWLTCIFFIPELKVLLEYAYFVNSVLLLGQSQLLASCINVELKLHAMVTRKCAKVDARVVCVESPRVVLLVDVYLPIQVWSGWQFPRSGAVAAAIFRHLSCDWDERSSMLSYPDYCRKTHGANESNWNLSDCHVLCCKLHPHVSSSSRKSLFELHELFKTLPGVGKQRMFNSSKIIPMDHSCRWGIWELSDDILTKILSSLDPMDLTRVSETCHHLRSLAASVMPCTKLNLFPHQLTAVEWMLHRERNAELSPHPLYAFLSTEDGFNFHVNTVSGEIVTGEAPTIRDFRGGMFCDEPGLGKTVTALSLIMKTRGTLADPPDEAQVVWCQHNGNQKCGYYEISGNNITGCSALGKRNVSQYISRTNDNHEYSSKKARMSNPDQHMIKLQSSCSMEVNKSPVEARFKESMHSNQYTRSLSRIKKNLCFTNEEEAIISKERETEGLIKANHASDVTPHLSQKKLPGKPEGDPFEYSDTWIQCDACHKWRKLADNSMASSSAAWFCSMNPDPLYQSCSVPEQHFRSTSRITYLPGFHLKGTHGGDRQNVSFFTSVLKEHYSLINSQTKKALAWLAKISTDKLAAMETNGIRGPILNTCTASGRHFNAFHKVFQAFGLLKRVDKGVCKWFYPQHLNNLTFDVAALGMALREPIDFVRLYLSRATLVVVPANLVDHWKTQIEKHVRPGQLRIYVWTDHRKPSVHCLAWDYDIVITTFSRLSAEWGPRKRSVLMQVHWFRVILDEGHTLGSSLNLTNKLQMAISLIASNRWILTGTPTPNTPNSQLPHLQTLLRFLHEESYGLNQKSWEAGVLRPFEAEMEEGRSRLLDLLHKCMISARKTDLQSIPPCIKKVVYLDFNEEHARSYNELVITVRRNILMADWNDPSHVESLLNPKQWKFRRATIKNVRLSCCVAGHIKVTHAGEDIQETMDMLVQSGLDPTSGEYTSIRCNLLYGGHCVRCKEWCRLPVITPCRHLLCLDCVSIDHTKCTCPGCSKLYEMQSRLPRPENPNPKWPVPKDLIELQPSYKQACIYMSSNSSCMALLMDGTMAMHKEQVISRAHRMGASRPIHVETLAMHGTIEEQMLGFLQVNLYKFKQISQFLLAMSVEEQKCLEGMIKNVAETGPLPLGKKLSIETKICETKGNMSYMMNFSVAISFYLIRINNVFNVETILFRIESNYIISSLILDGFIRNVHLSNLAVDDTLEEQTSYIFGSLVELDMIVQMAIVSIFHLGRATHPNLLDISDGQLECWLRDIMRCLYCM | 1319 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian11g01603 | 1319 | SMART | fbox_2 | 253 | 293 | IPR001810 | GO:0005515 | |
| Vian11g01603 | 1319 | ProSiteProfiles | Zinc finger CW-type profile. | 534 | 585 | IPR011124 | GO:0008270 | |
| Vian11g01603 | 1319 | CDD | F-box_SF | 252 | 284 | - | - | |
| Vian11g01603 | 1319 | Pfam | CW-type Zinc Finger | 539 | 582 | IPR011124 | GO:0008270 | |
| Vian11g01603 | 1319 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 720 | 892 | IPR027417 | - | |
| Vian11g01603 | 1319 | Gene3D | - | 1101 | 1181 | IPR027417 | - | |
| Vian11g01603 | 1319 | Gene3D | - | 701 | 897 | IPR038718 | - | |
| Vian11g01603 | 1319 | Pfam | MBOAT, membrane-bound O-acyltransferase family | 1 | 76 | IPR004299 | - | |
| Vian11g01603 | 1319 | SMART | ultradead3 | 291 | 863 | IPR014001 | - | |
| Vian11g01603 | 1319 | SUPERFAMILY | F-box domain | 244 | 286 | IPR036047 | GO:0005515 |
Showing 1 to 10 of 22 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vian11g01603 | - | - | gmx:100803102 | 1809.27 |
Showing 1 to 1 of 1 entries