Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01596 ATGGAGTCGAATTATGCAGAGGAGGAAAAAGCATGCATCTCTGCAATGCAGCATTGCTTTGGTCCAATATATTCTGCAGTTTTGAATGCAGCGATTGAGCTAAACTTGTTTGAGATCATAGCAAAGGCATCTCCAACAGGAGTTGGTGTGACAGCGTCTGATGTTGCCTCTCAACTTCCAACACAGCACCCAGAATTGGCTCGCAGGATTGATCGCATGTTGTCTCTGCTTGCTACTCATTCTCTTCTCACTTGTTCAACTCGCACAAACGAAAATGGTGAACCTCAGAGGTTATACCATCTTTCTCATGTTGGTCACTACTTCGTCAAAGATCACAGCAAGGGCTCTCTGGCTCCCCTATCAACTTTTCTTAGTCACCCTTCCATCGTCCATGTCTTGCTGAACTACAAGGAGGCACTTTTGGACTTTGAGAAGGGCTTGTACCAGAAGGTTCATGGAGTGCCTATTTATGAAGGCATATGCTCGGATCCCACACTGAGTAATATTTTTAATGAAGCAATGAGTAATCTTGGCACAATCGAGATTAAGAAGATTATAGAAATGTATAGAGGATTTGATAAAATATCTTTGCTAGTTGATGTGGGTGGTGGCATTGGCCAAAATCTTAATATGATAATCTCCAATTATCCTTCTATTAAGGGCATTAATTTTGATTTGCCTCATGTTATACAAAATGCTCCCATATATTCAGGGATAAAGCAAGTTGAAGGAAACATGTTTGAAAGTGTTCCACAAGGTGATGCTATAATATTAAAGGCAGTGTTACACAATTGGTCGGATGAAAAATGTGTAGAAATTTTAAAGAATTGCTACAAAGCTTTGCCAGAAAAGGGAAAGGTAATTGTTATGGAGATGATAATGCCTGAAGCAATTGACTCAACAGATGCAGATAAAATGGTCACTGGCTTTGACAACCTTATGTTTTTGGATGCTGGCACTGAAAGAACTGAGAAAGAATTTCATAATTTATCCAAACTCTCAGGATTTTCTCATTTTCAGCTTGTTTGTCGTGTCTTCTCAGCTTTGGGAGTTATAGAATTTCATAAGTGA 1071 0.394 MESNYAEEEKACISAMQHCFGPIYSAVLNAAIELNLFEIIAKASPTGVGVTASDVASQLPTQHPELARRIDRMLSLLATHSLLTCSTRTNENGEPQRLYHLSHVGHYFVKDHSKGSLAPLSTFLSHPSIVHVLLNYKEALLDFEKGLYQKVHGVPIYEGICSDPTLSNIFNEAMSNLGTIEIKKIIEMYRGFDKISLLVDVGGGIGQNLNMIISNYPSIKGINFDLPHVIQNAPIYSGIKQVEGNMFESVPQGDAIILKAVLHNWSDEKCVEILKNCYKALPEKGKVIVMEMIMPEAIDSTDADKMVTGFDNLMFLDAGTERTEKEFHNLSKLSGFSHFQLVCRVFSALGVIEFHK 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01596 356 Pfam Dimerisation domain 27 78 IPR012967 GO:0046983
Vian11g01596 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
Vian11g01596 356 Gene3D - 23 185 IPR036388 -
Vian11g01596 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 345 IPR029063 -
Vian11g01596 356 SUPERFAMILY "Winged helix" DNA-binding domain 7 112 IPR036390 -
Vian11g01596 356 Gene3D Vaccinia Virus protein VP39 167 345 IPR029063 -
Vian11g01596 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 16 356 IPR016461 GO:0008168
Vian11g01596 356 FunFam Caffeic acid 3-O-methyltransferase 1 108 - -
Vian11g01596 356 Pfam O-methyltransferase domain 144 337 IPR001077 GO:0008171
Vian11g01596 356 PANTHER O-METHYLTRANSFERASE 20 336 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01596 Vian-Chr11 26496341 26499096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01596 8 356 Monolignol Biosynthesis Gene Families AT5G54160 44.034 1.14e-97 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01596 - - gmx:100784030 471.855