Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01584 ATGGAGGAGAAATCAGAGAAGCAAGATGATAGCCACCCATCTCTCTTCTTCTCGGATCATGCCACCATCAAGGAAGAGAATTCTCCAAGAAAAGCCATTGGTGGTGGCAGTGATAGGCTGAAGAGAGATGAATGGAGTGAAGGGGCTGTGTCAACCCTTCTTGAGGCCTATGAGGCCAAATGGGTGCTCAGAAACAGAGCCAAACTCAAGGGCCATGACTGGGAAGATGTTGCAAAACATGTCTCATCAAGAGCCAACTCCACCAAGTCACCAAAGACACAGACTCAGTGCAAGAACAAGATTGAGTCCATGAAAAAAAGGTACAGATCAGAGTCTGCAACTACTGCTGATGCATCATCTTGGCCTTTGTACTCTCGCCTTGATCTTCTCCTGCGTGGCACAGGACCAATATCTTCACTCCCGCCAACACCAAATCCAACACCAACACCAATCATAGCACCATCATTTCAACCACCACACGCCACCACCAATAGTAACCAGGCTCTGGTGTTGTTGGATCCTCCTTCACTGGCTGTGTCACAAGCTCCTCCTTCTGCTGCTCCTCCACCACCCACACAAAACTCTCACGGATCCAATGGTGTTGAAAGACTAGTCAAGGAAGATGGGTTAGGAGGCAAGTCATGTGAGCATGTATCTGAGAAGAATGTGATGGACTCGGATAGTAGCACACCTGCTCTATACAGTGAAAAGGAGAAGGTGAGATGCAACAAGAGGAAGATGAAAAGTGAGAAGAAGAAGAGGGTGAGAAGGAACAGTAACAGTAATAACAATAACCAAAACAGTGAAGACATGGAGATAGCAGAAAGCATAAGGTGGCTAGCAGAAGTGGTAATGAGGTCAGAACAAAGCAGAATGGAGACAATGAAAGAGATTGAGAAGATGAGGGTTGAAGCTGAGGCAAAGAGAGGGGAGATGGAGCTGAAGAGAACTGAAATCATAGCCAACACTCAACTAGAGATTGCTAGGATCTTTGCAAGTGTCAATAAAGGTGTTGATTCTTCACTAAGAATTGGAAGAAGTTCATCATGA 1050 0.459 MEEKSEKQDDSHPSLFFSDHATIKEENSPRKAIGGGSDRLKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVAKHVSSRANSTKSPKTQTQCKNKIESMKKRYRSESATTADASSWPLYSRLDLLLRGTGPISSLPPTPNPTPTPIIAPSFQPPHATTNSNQALVLLDPPSLAVSQAPPSAAPPPPTQNSHGSNGVERLVKEDGLGGKSCEHVSEKNVMDSDSSTPALYSEKEKVRCNKRKMKSEKKKRVRRNSNSNNNNQNSEDMEIAESIRWLAEVVMRSEQSRMETMKEIEKMRVEAEAKRGEMELKRTEIIANTQLEIARIFASVNKGVDSSLRIGRSSS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01584 349 MobiDBLite consensus disorder prediction 201 223 - -
Vian11g01584 349 MobiDBLite consensus disorder prediction 135 163 - -
Vian11g01584 349 FunFam Trihelix transcription factor ASIL2 45 110 - -
Vian11g01584 349 Pfam Myb/SANT-like DNA-binding domain 42 129 IPR044822 -
Vian11g01584 349 MobiDBLite consensus disorder prediction 178 270 - -
Vian11g01584 349 MobiDBLite consensus disorder prediction 23 41 - -
Vian11g01584 349 Coils Coil 295 315 - -
Vian11g01584 349 Gene3D - 45 110 - -
Vian11g01584 349 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 28 334 IPR044823 -
Vian11g01584 349 MobiDBLite consensus disorder prediction 1 41 - -
Vian11g01584 349 MobiDBLite consensus disorder prediction 139 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01584 Vian-Chr11 26378855 26380787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01584 5 330 Trihelix Transcription Factor Family AT3G14180 25.737 2.17e-22 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vian11g01584 Myb_DNA-bind_4 8.3e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01584 - - gmx:100799917 443.736