Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01581 ATGAAAATCCCGTGTTGTTCGGTTTGCCAAACGCGTTACAACGAGGAGGAGAGAGTTCCTCTGCTGCTCCAATGCGGCCACGGCTACTGCAGAGAGTGTCTCTCTAGAATGTTCGCGCCCTCTTCGGACGCCACGCTGGCGTGTCCCAAGTGCCGACACGTGTCCACAGTGGGGAACTCCGTGCAGGCGCTGCGGAAGAACTACGCGGTGCTCGCGCTGGTCCACTCCACCATCACCGCCGCCAACGGAGCCGGGGGTGGAGGGGGAGGGGAGAATTTCGACTGGGACTACACCGACGAGGAGGAGGAGGAGGACGGGGGAGGGGAGGAGGATGAGGACGACGAGAAGCGGCGACGGAACAGCCGCGAGTCGCAGGCGTCGAGCTCTGGCGGGTGCGAGCCGGTGATCGAGGTCGGTGGCGGCGCGCACCAGGACCTGAAGTTGGTGCGGCGGATTGGAGAGGGGAGGAGGGCGGGAGTGGAGATGTGGATGGCGGTGATCAGCGGTGGCGGTGGTGTGGAAGGGGGACGGAGGTGCCGGCACAGCGTGGCGGTGAAGAAGGTGACTGTGGTGGAGGGGATGGATTTGGATTGGGTTCAGGGAAAGTTGGAGGATTTGCGTAGGGCTTCGATGTGGTGTAGGAATGTGTGCACTTTCCATGGGACAATGAGGGTGGAGGACAGTTTGTGCCTCGTGATGGATAAGTGCTATGGATCGGTTCAGTCCGAGATGCAGCGCAATGAGGGAAGGCTCACTTTGGAACAAGTCCTAAGATACGGGGCTGACATTGCCCGAGGGGTCGTTGAACTTCATGCTGCAGGTGTTGTTTGCATGAATTTAAAACCATCCAATCTTCTTCTTGACGCAAATGGTCATGCCGTGGTTTCTGATTATGGACTTGCTACAATTCTGAAGAAGCCTTCATGTTGGAAGGCACGACCAGAGTGTGATTCTGTGAAGATCCATTCCTGTATGGAATGTATAATGCTCAGCCCACATTATACAGCACCGGAGGCTTGGGAACCTGTGAAGAAGTCGTTAAATTTGTTTTGGGATGATGGAATAGGTATATCTTCCGAATCAGATGCCTGGAGTTTTGGTTGTACATTGGTGGAGATGTGCACGGGTTCCATTCCGTACGTGGAGCAACTCATTCTTTACTCAACTTTTAATTCTTATGTTCTTCCCTCTTTTTCCAAGTTTCTTAGTGCAAATTCTACATGCAGTTGGGCAGGTTTAAGTGCAGAGGAAATCTATCGAGCGGTTGTTAAAGCTAAGAAACTGCCTCCACAGTATGCTAGTGTGGTTGGAGGTGGAATTCCGAGGGAATTGTGGAAGATGATTGGAGAGTGCTTGCAATTCAAGCCATCTAAGAGGCCTACTTTTAGCGCTATGCTGGCAATATTTCTCCGTCATTTGCAGGAAATACCACGCAGCCCTCCTGCAAGCCCTGATAAATGGACAGTTGTCGTTGATGTTAAACTAGCAGCATTGTCTTATACACTGTTTATACATTTGTGTGAATACAGTGGCTTAGATAATAAGGGCTCTGTATCAACTGTGATCGAGCCTTCACCTGTACCTGAATTGGAAGTTCCTCAGGAAAACCCTAACCATCTTCATCGACTTGTGTCTGAAGGAGATACTGCAGGTGTTAGGGATCTTCTTGCAAAGGCTGTATTAGAAAATGGCAGCAACTACCTAACTTCGTTATTGGAAGCACAAAATGCTCATGGACAAACAGCTCTCCATTTAGCTTGTAGACGGGGCAGTGCAGAACTTGTCGAGACAATTTTGGAGTATAGAGAAGCAAATGTTGATGTATTGGACAAAGATGGAGATCCTCCTCTTGTTTTTGCATTAGCAGCTGGGTCCCTAGAATGTGTTTGTAGCCTTATCAAAAGAAATGCTAATGTGCAGTCAAGATTGAGAGATGGTGTTGGTCCATCTGTAGCTCACGTTTGTGCCTATCATGGCCAGCCAGATTGTATGCGAGAATTACTATTAGCCGGAGCTGATCCTAATGCGGTGGATGATGAAGGTGAATCTGTTCTGCATAGAGCAATTTCCAAGAAATACACAGACTGTGCACTTGTAATATTGGAGAATGGAGGATGTAAATCAATGTCCATCGTGAATTCAAAGAACCTGACACCACTGCACTTGTGTGTGGCAACATGGAATGTTGCTGTTGTGAAGAGATGGGCGGAAGTTGCAACTTCTGATGAGATTGCTGAAGCAATTGACATACCAAGCCCTATTGGCACTGCATTGTGCATGGCAGCTGCTTCTAAGAAAGACCATGAGAAAGAGGGCAGAGAACTGGTGCAGATACTGCTTGCAGCTGGAGCTGATCCCTCTGCTCAAGATTCACAAAATGGGAGGACAGCATTGCATACAGCTGCTATGACTAATGATGTCGACTTGGTTCAGGTTATTCTGGCTGCTGGGGTTGATGTGAACATTCGCAATGTGCACAACAGTATTCCTCTTCACTTGGCCTTAGCTAGGGGTGCTAAGGCATGTGTTGGACTGCTTCTAGCTGCTGGAGCAGATTATAATTTGCAGGATGACGATGGTGACAATGCTTTCCATATAGCAGCTGAGACAGCAAAAATGATTCGTGAAAATATGAACTGGCTTATTATAATGCTAATGAATCCTGATGCTGATATTGAAGTCAGAAACCACAGTGGCAAGACGCTACGTGACATTTTGGAGGCTCTCCCCAGAGAATGGTTATCCGAAGATCTGATAGAAGCACTCTCAAATAGGGGAGTTCATTTGTCTCCTACATCATTTGAAGTGGGAGAGTGGGTGAAGTTTAAAAAATCTGTCACAACTCCAACACATGGATGGCAAGGTGCTAATCCACAAAGTGTTGGTTTTGTGCAAAGTGTTCCAGACAAAGATAATCTCGTTGTTTCATTTTGTTCTGGAGAGGTTCATCTTCTGGCAAATGAAGTTATAAAAGTCATTCCATTGGACAGGGGACAACATGTACAACTGAAAGAAGATGTAAACGAGCCTAGATTTGGTTGGCGTGGGCAGTCACGTGACAGCATTGGGACAGTATTATGTGTTGACGATGATGGAATTCTCCGTGTTGGGTTTCCCGGAGCATCTAGAGGATGGAAAGCTGACCCAGCAGAGATGGAACGTGTTGAAGAATTCAAGGTTGGAGACTGGGTTCGCATTCGTCCAACTCTTACATCTGCAAAGCATGGACTAGGATCTGTGACTCCAGGAAGCATTGGCATTGTATATTGTATACGGCCAGACAGCAGTCTGTTAATAGAACTGAGTTATCTTCCAAATCCATGGCATTGTGAGCCAGAGGAGGTTGAGCATGTTGCTCCTTTTAGGATTGGTGATCGGGTATGCGTGAAACGGTCTGTTGCAGAACCTAGATATGCTTGGGGTGGTGAGACACATCATAGTGTTGGAAGAATAAGCGAGATTGAGAATGATGGTCTCTTAATTATAGAAATACCAAATCGACCCATACCATGGCAAGCTGATCCCTCGGATATGGAGAAGGTGGAAGATTTCAAGGTTGGAGATTGGGTAAGAGTGAAAGCTTCAGTGTCATCTCCAAAATATGGATGGGAAGATATTACAAGGAATAGCATTGGTGTAATTCATGGCCTGGATGAGGATGGCGATATGGTTGTTGCTTTTTGCTTCAGAAGTAAGCCTTTTTCTTGCTCAGTCACTGATGTGGAGAAAGTTCCTCCATTTGAGGTGGGACAAGAAATTCATGTGATTGCATCAGTTACTCAGCCTCGTCTTGGGTGGTCAAATGAATCACCAGCTACCGTTGGAAAAGTAGTGAGAATAGATATGGATGGTGCTCTCAATGTGAGGGTCACTGGTAGGCAGAGCTTGTGGAAAGTTTCTCCTGGAGATGCAGAGCGGCTTCCAGGATTTGAAGTTGGGGATTGGGTTCGCTCAAAACCAAGCCTGGGAACCAGACCAAGCTATGACTGGAATAGTGTTGGGAGAGAAAGTTTAGCTGTTGTGCATAGCGTACAGGATTCTGGATACTTGGAGTTGGCTTGCTGTTTTCGGAAAGGGAAGTGGATCACTCATTATACAGATGTTGAAAGGGTTCCTAGCTTTAAAGTTGGGCAGTATGTTAGGTTCCGAACTGGTTTGGTTGAACCAAGGTGGGGCTGGAGAGGAGCTCGGCCTGAATCTCAAGGGGTTATAACCAGTATTCATGCTGATGGAGAAGTCAGGGTCGCATTTTTTGGTCTTCCAGAACTGTGGAGAGGAGATCCGTCAGACCTTGAGATCGAACAAATATTTGAAGTGGGAGAGTGGGTGAGGTTGACAGAAAATGCAAATAATTGGAAATCAATTGGACCAGGTAGTGTTGGTGTGGTTCAAGGAATAGGGTATGAAGGAGATGAATTGGACAGAAGCATTTTTGTTGGATTTTGTGGGGAGCAAGAAAAGTGGGTAGGACCTACTTCACATCTTGAAAGATTTGACAAACTCTTCGTTGGACAGAAGGTTAGAGTGAAACAATATGTGAAGCAACCAAGATTTGGATGGTCAGGGCATACCCATGCTAGTCTCGGGACCATACAGGCTATTGATGCCGATGGAAAGCTTCGAATATACACTCCAGCAGGATCCAGAACATGGATGTTGGACCCATCAGAAGTGGAGGTGGTAGAAGAGAAGGAGCTCTGTATTGGTGACTGGGTGAGGGTTAAAGCTTCGGTTTCAACCCCAACACACCATTGGGGGGAAGTGAGTCATTCAAGCATTGGAGTTGTGCACAGAATGGAAGATGAAGATCTTTGGGTGGCTTTCTGTTTCATGGAGAGGCTATGGCTTTGCAAGGCTTGGGAAATGGAACGGATTAGGCCATTTAAAGTGGGTGACAAGGTAAGGATCAGAGATGGACTGGTGAACCCACGTTGGGGATGGGGAATGGAGACTCATGCTAGCAAGGGAGAGGTTGTAGGGGTAGATGCAAATGGAAAACTAAGAATAAAATTCCGGTGGAGGGAAGGGAGGCCCTGGATAGGAGATCCTGCTGATCTTGCCCTTGAGGAAGACTGA 5076 0.4734 MKIPCCSVCQTRYNEEERVPLLLQCGHGYCRECLSRMFAPSSDATLACPKCRHVSTVGNSVQALRKNYAVLALVHSTITAANGAGGGGGGENFDWDYTDEEEEEDGGGEEDEDDEKRRRNSRESQASSSGGCEPVIEVGGGAHQDLKLVRRIGEGRRAGVEMWMAVISGGGGVEGGRRCRHSVAVKKVTVVEGMDLDWVQGKLEDLRRASMWCRNVCTFHGTMRVEDSLCLVMDKCYGSVQSEMQRNEGRLTLEQVLRYGADIARGVVELHAAGVVCMNLKPSNLLLDANGHAVVSDYGLATILKKPSCWKARPECDSVKIHSCMECIMLSPHYTAPEAWEPVKKSLNLFWDDGIGISSESDAWSFGCTLVEMCTGSIPYVEQLILYSTFNSYVLPSFSKFLSANSTCSWAGLSAEEIYRAVVKAKKLPPQYASVVGGGIPRELWKMIGECLQFKPSKRPTFSAMLAIFLRHLQEIPRSPPASPDKWTVVVDVKLAALSYTLFIHLCEYSGLDNKGSVSTVIEPSPVPELEVPQENPNHLHRLVSEGDTAGVRDLLAKAVLENGSNYLTSLLEAQNAHGQTALHLACRRGSAELVETILEYREANVDVLDKDGDPPLVFALAAGSLECVCSLIKRNANVQSRLRDGVGPSVAHVCAYHGQPDCMRELLLAGADPNAVDDEGESVLHRAISKKYTDCALVILENGGCKSMSIVNSKNLTPLHLCVATWNVAVVKRWAEVATSDEIAEAIDIPSPIGTALCMAAASKKDHEKEGRELVQILLAAGADPSAQDSQNGRTALHTAAMTNDVDLVQVILAAGVDVNIRNVHNSIPLHLALARGAKACVGLLLAAGADYNLQDDDGDNAFHIAAETAKMIRENMNWLIIMLMNPDADIEVRNHSGKTLRDILEALPREWLSEDLIEALSNRGVHLSPTSFEVGEWVKFKKSVTTPTHGWQGANPQSVGFVQSVPDKDNLVVSFCSGEVHLLANEVIKVIPLDRGQHVQLKEDVNEPRFGWRGQSRDSIGTVLCVDDDGILRVGFPGASRGWKADPAEMERVEEFKVGDWVRIRPTLTSAKHGLGSVTPGSIGIVYCIRPDSSLLIELSYLPNPWHCEPEEVEHVAPFRIGDRVCVKRSVAEPRYAWGGETHHSVGRISEIENDGLLIIEIPNRPIPWQADPSDMEKVEDFKVGDWVRVKASVSSPKYGWEDITRNSIGVIHGLDEDGDMVVAFCFRSKPFSCSVTDVEKVPPFEVGQEIHVIASVTQPRLGWSNESPATVGKVVRIDMDGALNVRVTGRQSLWKVSPGDAERLPGFEVGDWVRSKPSLGTRPSYDWNSVGRESLAVVHSVQDSGYLELACCFRKGKWITHYTDVERVPSFKVGQYVRFRTGLVEPRWGWRGARPESQGVITSIHADGEVRVAFFGLPELWRGDPSDLEIEQIFEVGEWVRLTENANNWKSIGPGSVGVVQGIGYEGDELDRSIFVGFCGEQEKWVGPTSHLERFDKLFVGQKVRVKQYVKQPRFGWSGHTHASLGTIQAIDADGKLRIYTPAGSRTWMLDPSEVEVVEEKELCIGDWVRVKASVSTPTHHWGEVSHSSIGVVHRMEDEDLWVAFCFMERLWLCKAWEMERIRPFKVGDKVRIRDGLVNPRWGWGMETHASKGEVVGVDANGKLRIKFRWREGRPWIGDPADLALEED 1691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01581 1691 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 1 380 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Vian11g01581 1691 FunFam E3 ubiquitin-protein ligase KEG 518 748 - -
Vian11g01581 1691 ProSiteProfiles Ankyrin repeat region circular profile. 826 858 - -
Vian11g01581 1691 SMART ring_2 6 51 IPR001841 -
Vian11g01581 1691 Pfam Mind bomb SH3 repeat domain 1058 1178 IPR040847 -
Vian11g01581 1691 Pfam Mind bomb SH3 repeat domain 1184 1302 IPR040847 -
Vian11g01581 1691 Pfam Mind bomb SH3 repeat domain 1437 1558 IPR040847 -
Vian11g01581 1691 Pfam Mind bomb SH3 repeat domain 1567 1686 IPR040847 -
Vian11g01581 1691 Pfam Mind bomb SH3 repeat domain 1310 1431 IPR040847 -
Vian11g01581 1691 Pfam Mind bomb SH3 repeat domain 985 1052 IPR040847 -
Vian11g01581 1691 ProSiteProfiles Ankyrin repeat region circular profile. 793 824 - -
Vian11g01581 1691 ProSiteProfiles Ankyrin repeat profile. 793 825 IPR002110 GO:0005515
Vian11g01581 1691 ProSiteProfiles Ankyrin repeat profile. 578 611 IPR002110 GO:0005515
Vian11g01581 1691 Gene3D - 646 750 IPR036770 -
Vian11g01581 1691 ProSiteProfiles Ankyrin repeat region circular profile. 578 600 - -
Vian11g01581 1691 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Vian11g01581 1691 SUPERFAMILY RING/U-box 5 61 - -
Vian11g01581 1691 Pfam Protein kinase domain 180 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g01581 1691 ProSiteProfiles Protein kinase domain profile. 146 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g01581 1691 Gene3D - 752 798 IPR036770 -
Vian11g01581 1691 SUPERFAMILY Ankyrin repeat 573 901 IPR036770 -
Vian11g01581 1691 PRINTS Ankyrin repeat signature 579 594 IPR002110 GO:0005515
Vian11g01581 1691 PRINTS Ankyrin repeat signature 775 789 IPR002110 GO:0005515
Vian11g01581 1691 Gene3D - 799 922 IPR036770 -
Vian11g01581 1691 Pfam Ring finger domain 6 52 IPR001841 -
Vian11g01581 1691 Gene3D - 527 645 IPR036770 -
Vian11g01581 1691 ProSiteProfiles Ankyrin repeat profile. 647 679 IPR002110 GO:0005515
Vian11g01581 1691 CDD RING-HC_KEG-like 3 59 - -
Vian11g01581 1691 MobiDBLite consensus disorder prediction 94 111 - -
Vian11g01581 1691 Pfam Ankyrin repeats (3 copies) 772 857 IPR002110 GO:0005515
Vian11g01581 1691 Pfam Ankyrin repeats (3 copies) 557 640 IPR002110 GO:0005515
Vian11g01581 1691 SMART ANK_2a 578 608 IPR002110 GO:0005515
Vian11g01581 1691 SMART ANK_2a 680 711 IPR002110 GO:0005515
Vian11g01581 1691 SMART ANK_2a 715 746 IPR002110 GO:0005515
Vian11g01581 1691 SMART ANK_2a 753 788 IPR002110 GO:0005515
Vian11g01581 1691 SMART ANK_2a 647 676 IPR002110 GO:0005515
Vian11g01581 1691 SMART ANK_2a 793 822 IPR002110 GO:0005515
Vian11g01581 1691 SMART ANK_2a 826 855 IPR002110 GO:0005515
Vian11g01581 1691 SMART ANK_2a 859 894 IPR002110 GO:0005515
Vian11g01581 1691 SMART ANK_2a 612 641 IPR002110 GO:0005515
Vian11g01581 1691 FunFam E3 ubiquitin-protein ligase KEG 792 925 - -
Vian11g01581 1691 Gene3D Transferase(Phosphotransferase) domain 1 236 485 - -
Vian11g01581 1691 Pfam Ankyrin repeats (many copies) 650 697 IPR002110 GO:0005515
Vian11g01581 1691 SUPERFAMILY Protein kinase-like (PK-like) 140 484 IPR011009 -
Vian11g01581 1691 ProSiteProfiles Ankyrin repeat profile. 826 858 IPR002110 GO:0005515
Vian11g01581 1691 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 82 IPR013083 -
Vian11g01581 1691 MobiDBLite consensus disorder prediction 83 138 - -
Vian11g01581 1691 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01581 Vian-Chr11 26323402 26340671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01581 215 466 MAP Kinase Kinase Kinase AT4G18950 23.529 6.67e-14 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Vian11g01581 Pkinase 9.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01581 K16279 - gmx:100777576 3076.57