Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01576 ATGGCATCCATCGATAAGCAAAAGAGAGAAGAGGAAAAAGAACCGTACAGAATGGAAGAAGAAGAAGACGAGGATATCGAAGAAGAAGAAGGATGGGACGATTGGGAAGGAGAGCGAGAATCGGAATTCGCGTGTCTCTTCTGTGACTCCCAGTACAGTTCGTGCAGTTCTTTGTTCGATCATTGCGCCTCCCTTCACCATTTCGATTTCCACGCGATTAGAGCAAGTCTTAAACTGGATTTCTATGCCTCCTTCAAGCTCATCAACTTCGTTCGCTCTCAGGTGAGCTCATCGTTTTCTTTTCTTTTATGCTTTTTTTCATTTTTTTCTTTTATTAGCTTGGTCTTCATTGAAGAATCCGAATTCTATTTTAAAATGGCACTATCTTTAGATGTTCTAGTTTTATGTTTGTCTAAATATCTAATACCTTTCCTGCAAGATGATTCTCTGCTGTACAGTTTTGGGGAATGTGACGAAGAAGTTGATGATGGAAAATGTGATGCTTCTTTTTCTATTGATCATTTGAATAGGGATAGTTCTTCAAAAAGGGAGCTTATTAATGGTAAAGACTCAGTGGGACATGCTTTGTGCAGTGATAAGGATCCGAAAAAGGGACCTTTAATTGCTAATTCTCAAAATCACATTGCAAAACATATTAAGAAGGTCAATGAAAGTTATTTTGGGTCATACAGTTCATTTGGTATCCATCGAGAGATGTTAAGTGATAAGGTGAGAATGGATGCTTATGGTCAAGCAATTTTGAAGAATCCCTCCCTACTAAACGGGGCTGTGGTTATGGATGTTGGTTGTGGAACTGGAATCCTCAGCCTATTTTCGGCACAAGCTGGAGCTTCCAGGGTTATTGCTGTTGAGGCTAGTGCCAAGATGGCAGCAGTGGCATCTCAGGTTGCAAAGGATAATGGTCTTTGGTGGAACAAAACACAAAGTGGAATTGATGGTCTCCCGAAGCGAGTCATAGAAGTGGTTCACGGTATGGTTGAAGAGATTGATAAAACAGTTGAACTTCAACCTCATAGTGTTGATGTATTGCTAAGTGAATGGATGGGATATTGCTTACTGTATGAATCCATGCTTGGTTCAGTGCTTTATGCACGGGACCGGTGGTTGAAGCCTGGTGGTGCCATTCTTCCTGACACAGCAACTATTTTTGTTGCAGGATTTGGGAAAGGAGCAACAAGTCTTCCATTTTGGGACAATGTGTGTGGTTTTGACATGTCTTGCATTGGGAAGGAGCTTGTCATGGATGCTGCCCAAATTCCTATAGTTGATGTTCTGGACTCACAAGATTTAGTTACCAGTTCTGCGATTCTACAGTCTTTTGACTTGGCAACCATGAAGCCCAATGAAGTCGATTTCACTGCGACTACTACTTTGGAATTGAAACCAAGTGCTTCAGCAACATGGTGCTGGTGCTATGGTGCTGTCCTATGGTTTGAAACTGGTTTTACAAGGAGATTCTGCCGAGAAACACCAGCTGTGTTATCCACATCCCCTTATACCCCAAGAACACATTGGTCACAAACAATCTTAACCTTTCGAGAACCTATTGCAATGGGGTTTGGAAAAGAACAGAGGGGTAAACTGGAAGCAATTGGCACTGAGGTGTATCCTGCTGTAAATATCGATTTACGCATCAGCATTGTTCGATCTACAGAGCATCGCAGCATTGACATTTCCTTAGAAGCTACTGGTGTTAGTCCTGATGGTCTGAAACGTAGTTGGCCTGCTCAACTTTTCAATCTGCAGTAG 1770 0.4192 MASIDKQKREEEKEPYRMEEEEDEDIEEEEGWDDWEGERESEFACLFCDSQYSSCSSLFDHCASLHHFDFHAIRASLKLDFYASFKLINFVRSQVSSSFSFLLCFFSFFSFISLVFIEESEFYFKMALSLDVLVLCLSKYLIPFLQDDSLLYSFGECDEEVDDGKCDASFSIDHLNRDSSSKRELINGKDSVGHALCSDKDPKKGPLIANSQNHIAKHIKKVNESYFGSYSSFGIHREMLSDKVRMDAYGQAILKNPSLLNGAVVMDVGCGTGILSLFSAQAGASRVIAVEASAKMAAVASQVAKDNGLWWNKTQSGIDGLPKRVIEVVHGMVEEIDKTVELQPHSVDVLLSEWMGYCLLYESMLGSVLYARDRWLKPGGAILPDTATIFVAGFGKGATSLPFWDNVCGFDMSCIGKELVMDAAQIPIVDVLDSQDLVTSSAILQSFDLATMKPNEVDFTATTTLELKPSASATWCWCYGAVLWFETGFTRRFCRETPAVLSTSPYTPRTHWSQTILTFREPIAMGFGKEQRGKLEAIGTEVYPAVNIDLRISIVRSTEHRSIDISLEATGVSPDGLKRSWPAQLFNLQ 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01576 589 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 229 535 IPR029063 -
Vian11g01576 589 MobiDBLite consensus disorder prediction 1 15 - -
Vian11g01576 589 Gene3D Vaccinia Virus protein VP39 215 384 IPR029063 -
Vian11g01576 589 MobiDBLite consensus disorder prediction 16 34 - -
Vian11g01576 589 SUPERFAMILY beta-beta-alpha zinc fingers 27 163 IPR036236 -
Vian11g01576 589 MobiDBLite consensus disorder prediction 1 34 - -
Vian11g01576 589 CDD AdoMet_MTases 265 383 - -
Vian11g01576 589 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 223 546 IPR025799 GO:0016274|GO:0018216
Vian11g01576 589 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 46 571 IPR025799 GO:0016274|GO:0018216
Vian11g01576 589 Gene3D - 386 579 - -
Vian11g01576 589 Pfam Methyltransferase domain 265 380 IPR041698 -
Vian11g01576 589 FunFam Protein arginine N-methyltransferase 6 219 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01576 Vian-Chr11 26213536 26218591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01576 20 588 C2H2 Transcription Factor Family AT3G12270 54.976 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01576 K11436 - gmx:100781879 843.188