Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01548 ATGGCACTCTGCAATCGCGTCAGATCGGGAATCTCCCTCTTCAACAAATCCACCTCCCTCACTTCCCACCGTTCCAATCTCCAACGATCTCTCGTTGCCCCTTCCATTTCCCTCGCCTCCAGAAATTATGCTAACGTGCCCGGAGAAAAGGACCAAAAAGTTAAGGTTCCTTTGGCCTTGTATGGAGGTTCAGGAAACTATGCCTCTGCTTTGTACATTGCATCTGTCAAAGCTAATGCAATCGAAAAGGTCGAGTCTGAGCTTCTGCAATTTGTTGAGGCAGTACGGAATAGTTCCAAATTTTCACAGTTTATAAAGGATTTGTCTGTGGCTAAGGATGTTAGAGTAAAAGTCATCCAGGAGGTTTGTGGAGAAGCTAAGTTTTCGGACGTGACAAAGAACTTCCTTGTTATTGCTGCTGAGAATGGAAGGCTTAAAAACATAGACACCATTGCAAAGAAGTTTAGGGCGTTGGCAATGGCATACAAGGGAGAAGTGAAAGCGACTGTAACCACCGTTGTTGCTCTTCCCCCTGAAGAGGAAAAGGCTTTGAAGGACACTCTTCAAGAAATAATGGGTTCTGGAGCAAAGGTTCATCTTGAACAGAAGATTGATCCTAGCATACTTGGTGGTATTGTGCTGGAATTTAACCAGAAGGTCTTTGACATGTCTATTAAGACCAGGGCACAACAGATGGAGAGGATCCTCCGAGAGCCCGTATCCATTGCCAACATCTAA 738 0.4499 MALCNRVRSGISLFNKSTSLTSHRSNLQRSLVAPSISLASRNYANVPGEKDQKVKVPLALYGGSGNYASALYIASVKANAIEKVESELLQFVEAVRNSSKFSQFIKDLSVAKDVRVKVIQEVCGEAKFSDVTKNFLVIAAENGRLKNIDTIAKKFRALAMAYKGEVKATVTTVVALPPEEEKALKDTLQEIMGSGAKVHLEQKIDPSILGGIVLEFNQKVFDMSIKTRAQQMERILREPVSIANI 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01548 245 Gene3D - 64 156 IPR026015 -
Vian11g01548 245 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 64 164 IPR026015 -
Vian11g01548 245 PANTHER ATP SYNTHASE DELTA CHAIN 39 238 IPR000711 GO:0015986|GO:0046933
Vian11g01548 245 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 198 217 IPR020781 GO:0015986|GO:0016020|GO:0046933
Vian11g01548 245 NCBIfam ATP synthase F1 subunit delta 66 236 IPR000711 GO:0015986|GO:0046933
Vian11g01548 245 Hamap ATP synthase subunit delta [atpD]. 59 238 IPR000711 GO:0015986|GO:0046933
Vian11g01548 245 Pfam ATP synthase delta (OSCP) subunit 65 236 IPR000711 GO:0015986|GO:0046933
Vian11g01548 245 PRINTS ATP synthase delta subunit signature 196 211 IPR000711 GO:0015986|GO:0046933
Vian11g01548 245 PRINTS ATP synthase delta subunit signature 63 82 IPR000711 GO:0015986|GO:0046933
Vian11g01548 245 PRINTS ATP synthase delta subunit signature 211 229 IPR000711 GO:0015986|GO:0046933
Vian11g01548 245 PRINTS ATP synthase delta subunit signature 133 144 IPR000711 GO:0015986|GO:0046933
Vian11g01548 245 PRINTS ATP synthase delta subunit signature 144 158 IPR000711 GO:0015986|GO:0046933
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01548 3 245 Primary Pumps ATPases AT5G13450 43.621 8.45e-61 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01548 K02137 - gmx:100790990 417.927