Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01545 ATGAATGATGGTAGGCAAATGGAGTTGCAGTATGTAGATACTGGGTTTCCCTATACTGTTTCTGAAAGCTTCATGGATTTCTTCCAATGCCTCACCACGCACTTGCCTGTCAATTACGCTCACGCTGGCTCAGTGCTCGATCAGGAAAGTATCTACTGGTCAATGAACATGAACCCTTACAAGTTTGGATTGTCTGGCCCAGTAACTACATGCTATTATGGTTCTTACGAGATAAATGATCATTTTCCAAGAATGGAGATGGATAGGAGAGAGTGGGAATACCCTTCAACAATAGTCGTGGATGAACCTACTCCAACTGACTCTCCATCTGGAAGAGATGGAGTCACAAGCATGCAGACCATCCCAGAAGAATGCAGTCCAAATCATCAAGAATCCAGTAGTAGCCAGGTCATGTGGCAAGACAACATTGATCCCGATAATATGACATATGAGGAACTACTGGACCTGGGTGAGGCAGTGGGAACTCATAATCGTGGTCTTTCCCAAGAACTTATTGATACACTTCCAACCTCAAAGTACAACTTTGGGAGCTTATTCAAAAGAAAAAGTTCTGCTAAAAGGTTCTCCGCAACGTCGAAGGGGGTGAAGTCCGGTTTGGCTAGTGTGCTTGAAGTTATCGATCCCTAA 648 0.4414 MNDGRQMELQYVDTGFPYTVSESFMDFFQCLTTHLPVNYAHAGSVLDQESIYWSMNMNPYKFGLSGPVTTCYYGSYEINDHFPRMEMDRREWEYPSTIVVDEPTPTDSPSGRDGVTSMQTIPEECSPNHQESSSSQVMWQDNIDPDNMTYEELLDLGEAVGTHNRGLSQELIDTLPTSKYNFGSLFKRKSSAKRFSATSKGVKSGLASVLEVIDP 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01545 215 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 5 193 IPR033276 GO:0004842|GO:0016567|GO:0046621
Vian11g01545 215 MobiDBLite consensus disorder prediction 101 121 - -
Vian11g01545 215 MobiDBLite consensus disorder prediction 99 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01545 Vian-Chr11 25752304 25757664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01545 3 194 C3H Transcription Factor Family AT3G63530 50.515 2.37e-63 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01545 K19045 - gmx:100785290 312.768