Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01533 ATGACAACCCAATTGGCAACAGCCCACCCTTCTGTTCTCCTCGTTCCTCCCTCTTCTGCTTCTCTCTGTTTAGCAAGGAATAAAGATTTGATTCCAAAAAGATGCTCTATAATCAACAGGAAAAAGAATTATGCCATCACAGCTTTTGCAGGCAATGCACTTGGAAAATCAACTATCCAACTCACTGCAGTTTCGTCACCACTATTTACCGCTAGAGAAGCTCGCCTCTCACTCAGATTTCCTAGGTCTCAAAGACGCAATTCTACTGTCCGTGGACAAGCATTTATATATCATTCTTCTGGTTTCCGAATCCCATCAAATGCTGAGAAGCCAGAATGGTGGTGGAGGGCTTTATCCTGTGTTCCCTATCTGATAGCATTGCAGATATCTGCAGCTGGGATTTATCTAGAACCCATCCTTGAAAAATTTCCATTGTTTCACAGTTTGATTTTTTATATCCCAGGAGCTGTCAACCGATTACCAAACTGGTTCCCTATGTTATATTGCTATGTGGCTATTGTATGGGTGGTGAAAAACAAGGATTTGCCCCTTATCTTCAGATTCCATGTAATGATGGGAATGTTGCTGGAACTTGCTCTGCAGATAGTGTGGATTTCAAGCAATTTCATGCCACTTATACACTTCAAGGGAACATTGGGAACGTATTACTGGGCTGGCGTGGCGCTGGCATATATTTTTGTAATGATAAGGTGCATAAGGTGCGCGCTTCTGGGTACATTTGTGAGTTTCCCTGTACTTAGTGAATCAGCATTCCTTCATTCTTTATTCAGTTTAGGAGGATTTCAACGGCCTTTTTAG 819 0.4212 MTTQLATAHPSVLLVPPSSASLCLARNKDLIPKRCSIINRKKNYAITAFAGNALGKSTIQLTAVSSPLFTAREARLSLRFPRSQRRNSTVRGQAFIYHSSGFRIPSNAEKPEWWWRALSCVPYLIALQISAAGIYLEPILEKFPLFHSLIFYIPGAVNRLPNWFPMLYCYVAIVWVVKNKDLPLIFRFHVMMGMLLELALQIVWISSNFMPLIHFKGTLGTYYWAGVALAYIFVMIRCIRCALLGTFVSFPVLSESAFLHSLFSLGGFQRPF 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01533 272 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 38 261 IPR005691 -
Vian11g01533 272 Pfam Chloroplast import apparatus Tic20-like 83 257 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01533 Vian-Chr11 25583436 25585445 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01533 103 271 Chloroplast and Mitochondria Gene Families AT4G03320 57.396 3.29e-76 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01533 - - gmx:100783324 436.417