LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian11g01527	ATGGCTCCTCAATTGGCATTAACCCACTCTTCTCTTATCCGTCTTCCTTCCTCTCCTGCATCTCTTGGTTTTGGAAGGAATAAAGATTCGATTCCAGAAAGAGGCTGTATAATCAACAGGACAAAGAATCATACCATGACAGCTTTTGCAGGCAATGCTCTTCGTAATTCAGCTATCCAACTCACTACTGTTTCATCGCCTCTATCTTCTGATAAAGAAGCTCGCCTCTCACTCAGACATCTTATGTCTCAAAGATGCAATACCAAGTTCTGTGGACAAGCATATATATATCATTCGTCTGGTTTCCGAATCCCAGAAAATGCTGAGAAGCCAGAATGGTGGTGGAGAGCTTTATCCTGTATTCCCTACCTAATAGCATTGCAGATGTCTGCAACTGGGTTTTATCTAGAACCTATCATTCAAAAATTTCCATTCTTTCAGAGTTTGATTTTCTATATCCCAGGAGGTGTCAACCGATTACCAATCTGGTTTCCCATGTTATACTGCTATCTGGCTATTGTAGGAGTGGTGAAAAACAGGGACTTACCCCTTATCTTCAGATTCCATGTAATGACGGGAATGCTGCTGGAACTTGCTCTACAGATAGTGTACATTTCAAGCAACTTCATGCCACTTATACACTTCCCAGGGGGCACATTGGGGTCATATTACTGGGCTGGTGTTGCATTGGCATTTATTTTTATAATGATAAAGTGCATAAGGTGTGCGCTTCTGGGAACATTTGTGAGCATCCCTTTGGTCAGTGAATCAGCTTTCATTCATTCTTTATTTGGTTTAGGAGGATTACAACGGCCTTTTTAG	822	0.4148	MAPQLALTHSSLIRLPSSPASLGFGRNKDSIPERGCIINRTKNHTMTAFAGNALRNSAIQLTTVSSPLSSDKEARLSLRHLMSQRCNTKFCGQAYIYHSSGFRIPENAEKPEWWWRALSCIPYLIALQMSATGFYLEPIIQKFPFFQSLIFYIPGGVNRLPIWFPMLYCYLAIVGVVKNRDLPLIFRFHVMTGMLLELALQIVYISSNFMPLIHFPGGTLGSYYWAGVALAFIFIMIKCIRCALLGTFVSIPLVSESAFIHSLFGLGGLQRPF	273

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian11g01527	273	Pfam	Chloroplast import apparatus Tic20-like	83	258	IPR005691	-
	Vian11g01527	273	PANTHER	PROTEIN TIC 20-II, CHLOROPLASTIC	52	262	IPR005691	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian11g01527	Vian-Chr11	25488990	25491411	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vian11g01527	103	272	Chloroplast and Mitochondria Gene Families	AT4G03320	52.353	5.77e-68	210

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian11g01527	-		-	gmx:100790611	434.876