Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01526 ATGTCTGATGCTGAAGCCAAACTCTATAGCACTGCAAGAATGTCTCCCCTTTCTTTAACTTATTATGGATTTTGCCTCGCAAATGGAAATTACACAGTAAGACTTCACTTTGCTGAGATAATGTTCACAGATGATAACACATACAGAAGCCTAGGTCGACGTCTATTTGATGTTTACATTCAGGGAAAACGAGTATTGAAGGATTTCAATATAGTAAAGAAAGCACAAGGGGCTGGAAAGGCACATACAGAAAATTTTACTGCTTCAGTGAGTAACTCAACCTTAGAGATTCGTTTCTATTGGGCAGGAAAAGGGTCAACTGGTATTCCAAAAAGATCAGTATATGGCCCTCTTATTTCAGCAATATCTGTCACTTCTGATGATTTTAAACCTCCATCACCACCTGGTCATCATAAACGGGTCGTGCTTCTCATTGTGGTTGCAACATTGGTTATTCTCATCTTGGTTTTCTGCATACTTTGGTGGAGATTTTGCCTTAAAAGTAATAACTCATTATCTAAAGAATTCAAGGATTTAGATTTGAAAACTGGTGTATTTACCTTACGTCAAATCAAAGTAGCAACAAATAACTTCAATATTTCAAACAAGATAGGAGAAGGAGGATTTGGTCCTGTGTATAAGGGCATTTTGTGGGATGGCACAATGATAGCAGTCAAACAACTTTCGTCTAAATCAAAACAAGGAAACCGAGAGTTCATAAATGAGATAGGCTTGATCTCAGCTTTGCAACATCCTTATCTGGTTAAACTTTATGGTTGTTGTGTCGAGGGAGATCAACTATTGCTGGTATATGAATATTTGGAAAACAATAGTTTAGCACATGCTCTATTTGGTAGCGAAGAAGTTAGTTTACAATTAAATTGGGCAACAAGGCAGAAGATTTGCATAGGTATCGCTAAAGGTTTGGCTTTCCTACATGAAGAATCAAGAATCAAAATTGTTCACAGGGACATCAAGGCCACTAATGTGTTGCTTGATAAAGAGCTAAATCCAAAAATATCTGATTTTGGTTTAGCTAAACTTGATGAGGAAGACAACACTCATATAAGCACTCGAATAGCTGGGACCTAG 1092 0.3727 MSDAEAKLYSTARMSPLSLTYYGFCLANGNYTVRLHFAEIMFTDDNTYRSLGRRLFDVYIQGKRVLKDFNIVKKAQGAGKAHTENFTASVSNSTLEIRFYWAGKGSTGIPKRSVYGPLISAISVTSDDFKPPSPPGHHKRVVLLIVVATLVILILVFCILWWRFCLKSNNSLSKEFKDLDLKTGVFTLRQIKVATNNFNISNKIGEGGFGPVYKGILWDGTMIAVKQLSSKSKQGNREFINEIGLISALQHPYLVKLYGCCVEGDQLLLVYEYLENNSLAHALFGSEEVSLQLNWATRQKICIGIAKGLAFLHEESRIKIVHRDIKATNVLLDKELNPKISDFGLAKLDEEDNTHISTRIAGT 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01526 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 320 332 IPR008271 GO:0004672|GO:0006468
Vian11g01526 363 ProSiteProfiles Protein kinase domain profile. 198 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g01526 363 SUPERFAMILY Protein kinase-like (PK-like) 184 363 IPR011009 -
Vian11g01526 363 Pfam Protein kinase domain 199 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g01526 363 Gene3D Phosphorylase Kinase; domain 1 163 273 - -
Vian11g01526 363 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1 127 - -
Vian11g01526 363 FunFam Os07g0541700 protein 274 363 - -
Vian11g01526 363 Gene3D - 1 128 - -
Vian11g01526 363 SMART serkin_6 198 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g01526 363 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 167 273 - -
Vian11g01526 363 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 8 363 - -
Vian11g01526 363 Pfam Malectin domain 5 122 IPR021720 -
Vian11g01526 363 Gene3D Transferase(Phosphotransferase) domain 1 274 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01526 Vian-Chr11 25462562 25464497 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01526 8 363 Receptor kinase-like Gene Family AT1G53420 65.922 1.38e-165 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vian11g01526 Pkinase 1.1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01526 - - jre:109011992 528.094