Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01501 ATGAAATCCGGCAGAGACAAAGAGAAAGAGAACGATCGCTGCATCAGTTCGCATATGCAGACCCTCCATCGCCGTCTTATCCACGCCCTAAACCTTGGCACCAGACATTTTGATGAGAAGACAAATAGGTGGAGATGGCAGTGCGCCAACATTGAAGTGCAGAAAAATGTACTACGATCAATTGGTGCCTTTCTTGATTCCTTATCGGGCGATGCACGTGCAGCACGTCATACTGTTGTTAAGGAATCTGTTCCTGATATTTTAGGAGCATTATTATGGATTCTTCAATGCAAAAATGAGGCTTTATTAAGCATGGCATCAAATGTTGCAGTGAAGTTGGTTAGTGTTCTGCCTAATCCATTATTGCAATCACATATGTTGGATCTTGTTTATTGTCTATCATCATTGCTATCTTCACATCAAGTAGAAGTTGCTATACCCTGTGCTACCACTTTGAATTTTGTAATCTCAAATTTGAGTGCTACAAATGAGAAGGAAGTTATGGAAGCACTGAAAGAAACAGAGGCTACCCTTTGGATTGTTGGAAATATAAAGGATTTTGCTGAAGGTGTAAAGAAAATTGAGTATTTCGAAGAGATGACTTTACTTTTGAGCACTATACTATGGCGCTGGCCACCTTCTAGGTTCTCTGTTTGTAATGATGTAATACTTATGAAAGGTCTAGCAAACATCCATACAAAGACAGATAGTTCTATTAAACTTGCACTTCTAAAGTTGTACACGTCAATAGCTTTATGTGATTCTGCAGCAAGAAGACTTATAGAGGATGAAGAAATATTTCCACAAATGTTTGTGCAGGCAATGGGAAAATCCAACCCTCATGCTATTCGGATAGAGGGGTTTAGGCTTGCTCAGTGCCTATTGAGATCCCAAGATAATTGTTTAAAAGTGGTTGGTTTGTGTGGTGATGCTCTTGTTGAGGCCATAATTTGTGGAATGACAGAAACTAGGGTGACTTCTAAAAAGTTTGGAAACAACCATGGGTCTTTGTCAGTGGAAGCATGCCAGTTGGCTCTAATAACTCGCTGGGCAGGTGATCATCATACCAACTTTTGGAAACATGGAATTGATAGAGTCCTTCTTAGTCTTCTGATTGAAAATATTGAAGACCAATTGTTTGAACCCGTCTTGGCTTTGGAAAAACAAATATATATGGCAAAAGAGGGATTAAAAGCCAATTATCATCTTGGTCTTAGGAGTTATCTGTGGGACATTCTTGGGTGGCTTACAATTCATTGTGGAGAAAATTTAAACCCTTATACTCGTGGTAGTGAGCTCTGCATCAAGTTACTAATTACATGTGCATGCTTGAGTTTTGTGGATACACTTGAAAAATGGTGCAGAATTTGTCAAAAGGATATTGATGATCATTTTCAAAGTGAACCAGTATCAAGGGCCGTTCTAATGATGATTCATTCTCCATGTAATTCCATCTCCTCACACACTAAATTCTTATTATCAGATGTACTGAAGGTGAAAGGCATGCCATGCTTGAAAAGCTTATTACATACTCTAGATTATACATCATCCCTAGAAAGCTATGGTTCATTTGATAAACTTCAACTGGTTATTAATTTAATTGGGTTTACTTGTCTTTCAACTTTACCACAATACCGAAGATGTATCATTGAGAGCAAAGGGATAAAGGTGATTGTTCTTCTTCTGAAACGATGCTTAAATAATGACATTCATATCGAAAGGCAAAGCTTTATTCCTCATTTGCATACACATGAAAGGTCTTGGTGCTGTTTTGATAAAGAAGATTGGGAAGGCTCCAACATTCTCTTATTTTATAGTTTGTTGGCCTTAACAGAAATTCTTCATCAGTGTGACCTTTTACAAGACAATCCTCAGCAATTTTCTGGAGAGGTGACAAACATTACACCACAGTTTGTTAGCAAACTTCAAGAGATCTGTAAAAGCAACTCTTTCAGTCCTGGCGTGAGATGGTATGTTTCTTATATTCTAACTTATTTTGGATATTATGGCTTCCCAACTGAATTAGCCAAAAGGATTGGAGAATCTCTCAATAAGGAAGAATACTCAGATATGAAGCTTGTCTTAGCAAATGGGGAATCTCTGAGTGTTCATGTTGCTATTCTTGCTGTTCGATGTCCATCACTAGTGCCTCCTCAATTGTTACCTTGTAGGAAGAGTCCTAAAGAGATAGCAGATGAGTTTGTCAGAGAGACCGTGAGAGAAGTCCGATTATCTTCTCATGTTGATTATGAAGCATTGGTGTTGTTGTTGGAATATGTATACTTGGGATGCTTACATGCCAGTGAAGAAACAGCAAAGAAGCTAAAAATTCTTGCTAAGCGCTGCAATCTACAGCCTTTGTTCCAAATGCTTCACAGACAGCGTCCGAAATGGGGCTTACCTTTCCCCAGCTTTAATCTTACGTCAGCTTTTGGTTTAGCCGGAAGTTGTTTTTCGGATATCATATTGGGAGCTAAATCAAATGAGCTTGTTGGGTGGACATGCGATATTTGTTCTGACACAGTACCCCATATGCATGTTCACAAAGTTATATTGCAGTCTGGTTGTGATTATCTACAAGGTTTGTTCCGGTCAGGAATGCAAGAAAGTCATTCACAAGTAATAAAAGTTGATATTAGCTGGCAAGCATTGATTAAACTAGTGCAGTGGTTTTATTCTGATGAGCTGCCTGGTCCTCCATCTGGATGCTTGTGGGATAATATGGATGATCAAGAAAAGCTATTTAATCTACAACCATATGTGGAGCTTTATTGGCTTGCTGAGTTCTGGATTTTAGAAAATATTCAGGAAGCTTGCTTTAATGTTATTATGTCTTGTCTTGATTCTTCCTGGCGGTTGTCCATTAGAATAATCAAAATGGCTTATAATCTCTCTTTGTGGAAGTTAGTTGATATTGCTGCAAATCTCATGGCTCCTTCATATCGTCAATTACGAGATTCTGGTGAACTAGAAGAATTTGATGATGCACTAGTGCACTTGATTTATTCTGCTTCTATCCAACTTAACTAA 3030 0.3835 MKSGRDKEKENDRCISSHMQTLHRRLIHALNLGTRHFDEKTNRWRWQCANIEVQKNVLRSIGAFLDSLSGDARAARHTVVKESVPDILGALLWILQCKNEALLSMASNVAVKLVSVLPNPLLQSHMLDLVYCLSSLLSSHQVEVAIPCATTLNFVISNLSATNEKEVMEALKETEATLWIVGNIKDFAEGVKKIEYFEEMTLLLSTILWRWPPSRFSVCNDVILMKGLANIHTKTDSSIKLALLKLYTSIALCDSAARRLIEDEEIFPQMFVQAMGKSNPHAIRIEGFRLAQCLLRSQDNCLKVVGLCGDALVEAIICGMTETRVTSKKFGNNHGSLSVEACQLALITRWAGDHHTNFWKHGIDRVLLSLLIENIEDQLFEPVLALEKQIYMAKEGLKANYHLGLRSYLWDILGWLTIHCGENLNPYTRGSELCIKLLITCACLSFVDTLEKWCRICQKDIDDHFQSEPVSRAVLMMIHSPCNSISSHTKFLLSDVLKVKGMPCLKSLLHTLDYTSSLESYGSFDKLQLVINLIGFTCLSTLPQYRRCIIESKGIKVIVLLLKRCLNNDIHIERQSFIPHLHTHERSWCCFDKEDWEGSNILLFYSLLALTEILHQCDLLQDNPQQFSGEVTNITPQFVSKLQEICKSNSFSPGVRWYVSYILTYFGYYGFPTELAKRIGESLNKEEYSDMKLVLANGESLSVHVAILAVRCPSLVPPQLLPCRKSPKEIADEFVRETVREVRLSSHVDYEALVLLLEYVYLGCLHASEETAKKLKILAKRCNLQPLFQMLHRQRPKWGLPFPSFNLTSAFGLAGSCFSDIILGAKSNELVGWTCDICSDTVPHMHVHKVILQSGCDYLQGLFRSGMQESHSQVIKVDISWQALIKLVQWFYSDELPGPPSGCLWDNMDDQEKLFNLQPYVELYWLAEFWILENIQEACFNVIMSCLDSSWRLSIRIIKMAYNLSLWKLVDIAANLMAPSYRQLRDSGELEEFDDALVHLIYSASIQLN 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01501 1009 Gene3D - 25 344 IPR011989 -
Vian11g01501 1009 Gene3D Potassium Channel Kv1.1; Chain A 671 794 IPR011333 -
Vian11g01501 1009 Gene3D Potassium Channel Kv1.1; Chain A 815 987 IPR011333 -
Vian11g01501 1009 Pfam BTB/POZ domain 844 907 IPR000210 GO:0005515
Vian11g01501 1009 Pfam BTB/POZ domain 681 791 IPR000210 GO:0005515
Vian11g01501 1009 SUPERFAMILY POZ domain 844 944 IPR011333 -
Vian11g01501 1009 ProSiteProfiles BTB domain profile. 689 769 IPR000210 GO:0005515
Vian11g01501 1009 SUPERFAMILY ARM repeat 49 734 IPR016024 -
Vian11g01501 1009 CDD BTB_POZ_ZBTB_KLHL-like 846 896 - -
Vian11g01501 1009 PANTHER OS06G0674800 PROTEIN 5 1008 IPR044953 -
Vian11g01501 1009 SMART BTB_4 689 799 IPR000210 GO:0005515
Vian11g01501 1009 SMART BTB_4 835 947 IPR000210 GO:0005515
Vian11g01501 1009 SUPERFAMILY POZ domain 669 791 IPR011333 -
Vian11g01501 1009 ProSiteProfiles BTB domain profile. 819 900 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vian11g01501 BTB 1.4e-06 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01501 - - gmx:100786565 1703.72