Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01496 ATGGGAAACAAGTGGTCAAAGATTGCATCACGTTTGCCTGGTAGGACAGACAATGAGATCAAGAATGTCTGGAACACCCACTTAAAGAAAAGGTTGTCTCCTAAAAAAACTTCAGAATCAAGTACAGATGAATCCAAGCCAGAATCAACAATAACTTCCACCTCTTCCTCTTCCTCTCAGTCCTTTTTCTCAATTGAGAGGCCAAATTCACCCAAGAGCACTACACCTTATACTAATGAATTCTGTGACCAAGCAGAGCAATTATCAATGGAAGATAAAATTGAGCAGGATTCAGAAAAAGCAGTGTCAAGTGAACTACTAATTGGCATGACTGAGGATCCAAAAGAGTCATCGGCTTCATTTTCTTGTGAGTCAAATATTGTAAACTCGAGCCAGAATGTTGCACAGAAACCAGAAGAGACATTGGCTTCGCCCTTATCTGTATCAATATATACTGTTGAGACAATTAATATTGTAAATTCAGGCCAGAAAGTTGCACACAAACCAGAACAACAATTGGCTTCTCCATCATCCTACCTAGGACCTTATGATGTCGGCCATATTTTAGAAATTCCATGGGAACCAGATTATGAGTTTTGGAAGTTATTAGATGATGATAGCCCTGGATCTTTTCAATCAAAGGAAGTCCAATTAGGTGAGTTCTCAGCCAACCAAAACATGATTCTTGGAGAAGAGGGTGTTCAAGATGGTGAAGCAAGGAAGTGGACCAATGATTTTGAGAATGAGTTTGGAGTAGTAGGTGAGATAAAGGAGTCAAACAAGGATCATAATTTCCTACCAAAAAACTATGCAGTTGAGCCACAAATGGACCACACTAAGGCATTTAATTTCGATGATATGACAGAAGCAGAATCTGAATTGGACTTTGGTTCTATCCCATTATGGCTCTCTTCGCCTCAAAATACTACTCTCTACTTTAATACAGACCAGTAG 954 0.3931 MGNKWSKIASRLPGRTDNEIKNVWNTHLKKRLSPKKTSESSTDESKPESTITSTSSSSSQSFFSIERPNSPKSTTPYTNEFCDQAEQLSMEDKIEQDSEKAVSSELLIGMTEDPKESSASFSCESNIVNSSQNVAQKPEETLASPLSVSIYTVETINIVNSGQKVAHKPEQQLASPSSYLGPYDVGHILEIPWEPDYEFWKLLDDDSPGSFQSKEVQLGEFSANQNMILGEEGVQDGEARKWTNDFENEFGVVGEIKESNKDHNFLPKNYAVEPQMDHTKAFNFDDMTEAESELDFGSIPLWLSSPQNTTLYFNTDQ 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01496 317 ProSiteProfiles Myb-like domain profile. 1 28 IPR001005 -
Vian11g01496 317 Gene3D - 1 56 - -
Vian11g01496 317 MobiDBLite consensus disorder prediction 44 84 - -
Vian11g01496 317 SUPERFAMILY Homeodomain-like 2 34 IPR009057 -
Vian11g01496 317 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 125 - -
Vian11g01496 317 MobiDBLite consensus disorder prediction 23 43 - -
Vian11g01496 317 Pfam Myb-like DNA-binding domain 1 28 IPR001005 -
Vian11g01496 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 32 IPR017930 -
Vian11g01496 317 MobiDBLite consensus disorder prediction 23 84 - -
Vian11g01496 317 CDD SANT 3 28 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01496 Vian-Chr11 24966391 24967461 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01496 1 61 MYB Transcription Factor Family AT3G23250 55.224 2.03e-16 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vian11g01496 Myb_DNA-binding 3.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01496 K09422 - gmx:100101836 382.489