Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01454 ATGGATATGACGGAAATTTCAATCTTGCACCATGTGGGGATTGTGCTGATTGCGATTTGGATTCTCTCTGCACTCAATTCGTGCCACTCTGTTGTTTATTTTGTAGCTTTGATCTATCTTTTCCTGGTTCATGAGCGTTACATTACGAGGCTGCGGAAGAAGTTGCAGTTTGAGGAGAGGAAGCAAGCTAATCAAAGAAGGGTGCTTTCAGATTCTGAAACAGTCCGGTGGTTGAACCATGCAGTTGAAAACATATGGCCTATATGTATGGAACATATTGTCTCTCAGAAGATATTATTCCCTATCATACCATGGTTCTTAGAGAAGTACAAACCTTGGACTGCTAAGGAAGCTGTTGTTCAGCACCTATACTTGGGAAGAAATCCACCTATGTTTACTGAAATCAGGGTTCTTCGCCAGATTGACGATAACCACTTGGTTCTGGAGTTAGGAATGAATTTTCGTTCTGCTGATGATATGAGTGCAATACTCGCTGTCAAACTAAGGAAAAGATTGGGGTTTGGAATGTGGGCAAAATTGCACATTACAGGCATGCATGTAGAAGGGAAGGTATTAGTTGGGGTAAAGTTTCTCTCAACATGGCCTTTTCTTGGCCGTTTGCGTGTATGCTTTGTTGAACCTCCATATTTTCAAATGACTGTCAAACCTATTTTTACTCATGGGCTTGATGTGACTGAACTTCCAGGCATTGCTGGGTGGCTAGATAAGTTGCTGTCTATTGCTTTTGAACAAACCCTTGTTGAGCCCAATATGCTGGTTGTTGATGTTGAGAAATTTGTTTCGCCAGAACAAGAATGTTGGTTCTCTGTGGATGGGATGGAGCCTGTTGCTTATGCAAAAGTAGAAGTTATTGAAGCAACTGACATGAAGCCATCTGATCTAAATGGATTAGCGGATCCTTATGTGAAAGGCCATATGGGTGGATACAGATTTAGGACAAAAATACAAAGGAAAACACTTGCTCCAAAATGGCATGAAGAATTTAAAATTCCCATCCTAACATGGGAGTCTGATAATCTACTGGTTATTGCAGTTCGTGACAAGGACCATTTCTATGATGATATCCTTGGGGATTGTTCTGTGAACATCAACGGCTTTAGGGATGGGAAAAGACATGATATATGGCTGCAACTTGAGAACATGAAAATGGGGAGACTGCGTTTGGCAATAACTATTATTGAAGCTAATGGAAAGGAAAGCATGGACTTTGAAGTACGAAAAAACTCATTCGGAGCACATAACACTGCTGATAATAGTTCCTCTTCACATGTTCCACCTGAAAAATCTCAGAAGGTGGCAGATAACTATGAGCCTATAGACATCGAAGGACAAAAGCAGACAGGAGTTTGGGTTCATCACCCAGGAAGTGAAGTTTCCCAAAGGTGGGAGCCTAGGAAAGGGAAAAGTCGGCGCCTTGATACTGAAATTCATGGAGAACCTAATGATTTAGTTGGCAGCGGTAGATCAACTGAATCTGGATCCTTTAACAATGACAGCAGCAGTTCTGATAACAATCCTGAAGAAAAGCACCGCCTGAGATCGTTTAGGAGGGGCCTGCACAAGATTGGTTCAGTATTCCACCGAAATAAAGGGGAGGAGCCTGTTCAAGAGGACTATCTATCTCCACATGATAACATTAGGTCAATGAATTCTAAGGGGATGATTGGTGTGAAGTTTGTCATGGATGAGAACATTTCTGACTTTCCAACTCCTAAGGTTCAAGAAGAAAGGGTATCAATTGAAGAGAGTGGTTCTGAAACCCCTGCAAAGGGACATGCGAAGGATGTGGCAAAGAGTTTTTTGAAACAAGCAGGAAAATCGGCTCGAGGCTTGAAACAAGTTATTTCTTGTAAACCAAAGAAATCTAAAGATGAGTCTCAAGCACTTCCAGAAAGGGTAAATGAATCTGATTCTTCAGATGATGAATCTACCGCAGTTGAAAGAATTTCAGTTGTTTCTGAGGCTATGACCCCAGGCAGCAATGATTCCCCCAATTCTAAGGTACATGTGGTTCAAACAGTTCCTTCTAACACTCATGAGGACAATGAAGTCCCAATGGATGTAGTTAATGTAAAAGATGACCCTTTAAAAGCATGTTCCCCTGAAAGAAGGTCAAGTAAAGAGTTTGTTAAATCTGATGAATTGGAGCATGTTCAAGAGGAAAATGTGAGCAGATAA 2199 0.4129 MDMTEISILHHVGIVLIAIWILSALNSCHSVVYFVALIYLFLVHERYITRLRKKLQFEERKQANQRRVLSDSETVRWLNHAVENIWPICMEHIVSQKILFPIIPWFLEKYKPWTAKEAVVQHLYLGRNPPMFTEIRVLRQIDDNHLVLELGMNFRSADDMSAILAVKLRKRLGFGMWAKLHITGMHVEGKVLVGVKFLSTWPFLGRLRVCFVEPPYFQMTVKPIFTHGLDVTELPGIAGWLDKLLSIAFEQTLVEPNMLVVDVEKFVSPEQECWFSVDGMEPVAYAKVEVIEATDMKPSDLNGLADPYVKGHMGGYRFRTKIQRKTLAPKWHEEFKIPILTWESDNLLVIAVRDKDHFYDDILGDCSVNINGFRDGKRHDIWLQLENMKMGRLRLAITIIEANGKESMDFEVRKNSFGAHNTADNSSSSHVPPEKSQKVADNYEPIDIEGQKQTGVWVHHPGSEVSQRWEPRKGKSRRLDTEIHGEPNDLVGSGRSTESGSFNNDSSSSDNNPEEKHRLRSFRRGLHKIGSVFHRNKGEEPVQEDYLSPHDNIRSMNSKGMIGVKFVMDENISDFPTPKVQEERVSIEESGSETPAKGHAKDVAKSFLKQAGKSARGLKQVISCKPKKSKDESQALPERVNESDSSDDESTAVERISVVSEAMTPGSNDSPNSKVHVVQTVPSNTHEDNEVPMDVVNVKDDPLKACSPERRSSKEFVKSDELEHVQEENVSR 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01454 732 MobiDBLite consensus disorder prediction 419 435 - -
Vian11g01454 732 MobiDBLite consensus disorder prediction 465 485 - -
Vian11g01454 732 MobiDBLite consensus disorder prediction 618 675 - -
Vian11g01454 732 MobiDBLite consensus disorder prediction 492 509 - -
Vian11g01454 732 CDD C2 287 385 - -
Vian11g01454 732 ProSiteProfiles C2 domain profile. 269 383 IPR000008 -
Vian11g01454 732 MobiDBLite consensus disorder prediction 624 651 - -
Vian11g01454 732 MobiDBLite consensus disorder prediction 703 732 - -
Vian11g01454 732 CDD SMP_SF 94 262 - -
Vian11g01454 732 Gene3D C2 domain 275 403 IPR035892 -
Vian11g01454 732 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 71 264 IPR031468 GO:0008289
Vian11g01454 732 MobiDBLite consensus disorder prediction 419 518 - -
Vian11g01454 732 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 280 401 IPR035892 -
Vian11g01454 732 SMART C2_3c 285 382 IPR000008 -
Vian11g01454 732 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 1 695 - -
Vian11g01454 732 Pfam C2 domain 287 385 IPR000008 -
Vian11g01454 732 MobiDBLite consensus disorder prediction 581 600 - -
Vian11g01454 732 MobiDBLite consensus disorder prediction 575 600 - -
Vian11g01454 732 MobiDBLite consensus disorder prediction 661 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01454 Vian-Chr11 24443270 24448961 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01454 278 397 Lipid Metabolism Gene Families AT3G61300 29.600 1.74e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01454 - - gmx:100779958 1149.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g01454 11 24443270 24448961 Vian11g01454 11 24443270 24448961 ECH