Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01452 ATGACCGAAGAGGACAAGCCCATAGCCTCCGTCGTTGGCCACCAGCACCAGCACCATCACCACCACCCTCCGCCGCAGCCACTACCCGGTCCACCACCACAGTATGGCACCTTCCAAGGTGTCGCCAACTACCCTCCTCCGCCCGAGCCACATCCCGCTATTGGCTTTCCCCAACCCGTTCCACCGGCCGGCGCCGTCAACGCCGGTCCTCTTCCACCGTACTACCCGGGATACCAAGCAGTACCCGGTTACGCAGTTGCAGAAGGAAGACCTGTAAGAGAACGGCGCCTTGGTTGCTGTGGCATTGGTTGTGGCTGGTGTCTGTTTATACTAGGCTTCTTTCTTGCTGCCATTCCATGGTACGTTGGGGCAATAATTATGCTGTGTTCCAGAGTAGACCATCGAGAGAAACCTGGATATGTTGCTTGTGTAGTTGCTGCTGTTCTGGGTACAATTGCGATTATTCTTGGTGTTGCAAAGGGAGCAGATGACTGGTAA 498 0.5562 MTEEDKPIASVVGHQHQHHHHHPPPQPLPGPPPQYGTFQGVANYPPPPEPHPAIGFPQPVPPAGAVNAGPLPPYYPGYQAVPGYAVAEGRPVRERRLGCCGIGCGWCLFILGFFLAAIPWYVGAIIMLCSRVDHREKPGYVACVVAAVLGTIAIILGVAKGADDW 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01452 165 MobiDBLite consensus disorder prediction 1 42 - -
Vian11g01452 165 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 1 165 IPR044804 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01452 Vian-Chr11 24418787 24421233 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01452 3 165 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 34.404 1.28e-26 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01452 - - gmx:100810998 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g01452 11 24418787 24421233 Vian11g01452 11 24418787 24421233 ECH