Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01448 ATGAGGTTTTCGGGTTACATAGCTCAATGGAGAAGCGCAGCGAAGGAAGCGATGGACCGCACAGGCATCACTGTGAATTTCCTGTGTTGGCTTCACTTCACCAGCAACTACCTCTGTTCCCCGGCGTATGGGGTTAGCATGCTCCCCACTCTCAACGTCACCGGCGACATCCTCCTCGCCGACCACCTCTCCCCGCTGCTCGGGAACGTCGGCCACGGCGACTTGGTTCTCGTTCGGTCCCCTCTCAACCCTAAAATCAGGTTGACGAAGCGCGTCGTGGCCGTGGAAGGGGACACCGTCACTTACTTCGACCCGTTGCACTCTGAAGCTTCTCAAGTTGCAGTGGTGCCAAAGGGGCATGTTTGGATTCAAGGGGATAACATTTACGCCTCCCGTGACTCACGCCATTTCGGTCCTGTCCCATATGGTCTCATTGAAGGAAAAGTGTTTTTCCGGAGTGAGGTAGAGTTGTATTGA 477 0.5493 MRFSGYIAQWRSAAKEAMDRTGITVNFLCWLHFTSNYLCSPAYGVSMLPTLNVTGDILLADHLSPLLGNVGHGDLVLVRSPLNPKIRLTKRVVAVEGDTVTYFDPLHSEASQVAVVPKGHVWIQGDNIYASRDSRHFGPVPYGLIEGKVFFRSEVELY 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01448 158 FunFam Inner membrane protease subunit 1 35 157 - -
Vian11g01448 158 Gene3D Umud Fragment, subunit A 41 155 - -
Vian11g01448 158 CDD S26_SPase_I 44 149 IPR019533 GO:0004252|GO:0006465
Vian11g01448 158 SUPERFAMILY LexA/Signal peptidase 44 152 IPR036286 -
Vian11g01448 158 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 9 152 - -
Vian11g01448 158 Pfam Signal peptidase, peptidase S26 34 103 IPR019533 GO:0004252|GO:0006465
Vian11g01448 158 Pfam Signal peptidase, peptidase S26 111 152 IPR019533 GO:0004252|GO:0006465
Vian11g01448 158 PRINTS Bacterial leader peptidase 1 (S26A) family signature 88 100 IPR000223 GO:0006508|GO:0008236|GO:0016020
Vian11g01448 158 PRINTS Bacterial leader peptidase 1 (S26A) family signature 116 135 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01448 Vian-Chr11 24377768 24381600 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01448 47 152 MADS-box Gene Family AT1G29960 49.533 2.85e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01448 K09647 - cave:132173278 229.95