Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01440 ATGCTGTTAGTTATTGCTTTCGTTATTGCTCAGCTGGTAAGCATAGCAGTGTATGCTGACTGGAGCTTTGCAAAGGTGAAAGGAATTGGTTGGGGTTGGGCAGGAGTCATCTGGCTATACAGTATTGTCTTCTACTTTCCCCTTGACCTCATGAAGTTTGCCATCCGTTACATATTGAGTGGCAAGGCTTGGCTAAACCCCCTAGAAAACAAGACTGCCTTCGCAACCAAGAAAGACTATGGTAAAGAGGAGAGGGAAGCTCAGTAG 267 0.4569 MLLVIAFVIAQLVSIAVYADWSFAKVKGIGWGWAGVIWLYSIVFYFPLDLMKFAIRYILSGKAWLNPLENKTAFATKKDYGKEEREAQ 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01440 88 Gene3D - 1 58 - -
Vian11g01440 88 PANTHER CALCIUM-TRANSPORTING ATPASE 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01440 Vian-Chr11 24292233 24292581 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01440 2 88 Primary Pumps ATPases AT4G30190 80.899 4.34e-44 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01440 K01535 - var:108333633 166.007