Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01434 ATGGAAAAGGAAGGCACGGATTCTCGAAAGCAATCGAGACTCGTCATCATCGAACTGGCCAACATGACAAGCGTTCCGATGGCCCTAAACGCCGTCGTTCGCCTCAACGTCGCCGACGCCATCTGGAACTCCGGCGCCAACATCCCCATCTCCGCCGCCCGGATCCTCCCCCGCATCCTCCCCGCCGGCGACGCCGAGAACCTCCAGCGACTCCTCCGCGTCCTCACCAGCTACGGCGTCTTCCAGGAGCACATCGACGCCGGCGAACGCAAGTACTCCCTCACCGACGTCGGCAAAACGCTTGTCACTGACGAGCAAGGCCTCTCCTACGGGGCTTACGTGCTTCAACACCACCAGGACGCGCTGATGCGAGCGTGGACATTGGTTCACGAGGCAGTGGTGGACCCTACGAAGGAGCCGTTCGAGAGGGCGAACGGAGAGGGAGCGTATGGGTATTATCTGAAGCAGGAAGAGATGAACGAGTTGATGGTGAAGGCCATGTCAGGGGTGTCAGTGCCCTTCATGAAGGCCATGTTAGAGGGCTACGATGGCTTCCAAGGTGTGGAGAAGCTGGTGGACGTGGGTGGTAGTGGCGGTGACTGCCTGCGCATGATCCTGCAGAAACACCCCACCATCAAGGAGGGGATCAACTTCGACCTCCCTGAAGTTGTGGCCAAAGCACCACCAACCCCATATGTAACCCATGTGGGTGGTGACATGTTCAAATCTATTCCCCAAGGAGACGCTATCTTCATGAAGTGGGTGCTAACAAATTGGACGGACGAGGAAATGAAGGAGATAATGCGGAACTGTCACAGGGCACTTCCTGAGGGAGGGAAACTGATAGCTTGTGAGCCAACGCTGCCAGAGAACTCAGATGAGAGTCACAGAACAAGGACTTTGCTTGAGTGTGACATTTTTATTATGACAATCTACAACGGGAAGCACAGAACTGAAGAACAGTTCAGGCAGTTAGCCATTGATGTAGGTTTCCCTAGTTTCCGAGCCATCGATGTTGACCATTTCTTCTCTGTTCTTGAGTTTCAGAAATGA 1053 0.548 MEKEGTDSRKQSRLVIIELANMTSVPMALNAVVRLNVADAIWNSGANIPISAARILPRILPAGDAENLQRLLRVLTSYGVFQEHIDAGERKYSLTDVGKTLVTDEQGLSYGAYVLQHHQDALMRAWTLVHEAVVDPTKEPFERANGEGAYGYYLKQEEMNELMVKAMSGVSVPFMKAMLEGYDGFQGVEKLVDVGGSGGDCLRMILQKHPTIKEGINFDLPEVVAKAPPTPYVTHVGGDMFKSIPQGDAIFMKWVLTNWTDEEMKEIMRNCHRALPEGGKLIACEPTLPENSDESHRTRTLLECDIFIMTIYNGKHRTEEQFRQLAIDVGFPSFRAIDVDHFFSVLEFQK 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01434 350 FunFam Caffeic acid 3-O-methyltransferase 107 350 - -
Vian11g01434 350 Pfam O-methyltransferase domain 126 331 IPR001077 GO:0008171
Vian11g01434 350 PIRSF O-mtase 1 350 IPR016461 GO:0008168
Vian11g01434 350 Gene3D Vaccinia Virus protein VP39 106 350 IPR029063 -
Vian11g01434 350 SUPERFAMILY "Winged helix" DNA-binding domain 8 104 IPR036390 -
Vian11g01434 350 CDD AdoMet_MTases 190 284 - -
Vian11g01434 350 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 348 IPR029063 -
Vian11g01434 350 Gene3D - 1 105 IPR036388 -
Vian11g01434 350 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 350 IPR016461 GO:0008168
Vian11g01434 350 PANTHER O-METHYLTRANSFERASE 19 335 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01434 Vian-Chr11 24226596 24232441 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01434 1 350 Monolignol Biosynthesis Gene Families AT3G53140 70.474 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01434 - - gmx:100784957 601.282