LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian11g01429	ATGGAAATGCGGAAGAAATCTCCTGTGCCATTTGAACAGAAATTTTCAAATGCAGATCCATTGGCACTGCGTCTATTGCAAAGGCTTTTAGCATTTGATCCAAAGGATCGACCAACAGCTCAAGAGGCACTATCCGATACATTCTTTAAGGGTTTGGCCAAAGTTGAGAGAGAACCGTCGTGTCAGCCAATTTCACGATTAGAATTCGAGTTTGAGAGGAGACGGGTGACAAAGGACGAAGTTAGGGAACTAATATATCGGGAAATACTGGAATATCATCCCCAGTTGCTTAAAGATTACATGAATGGAACTGAAGGCACTCACTTCCTTTACCCTAGTGCAATAGATCAATTCAGAAAGCAATTTGCTTATCTTGAGGAAAATCATGGTAAAAGTGGTCCTGTGATTCCTCCAGAAAGGAAGCATGTCTCCCTTCCAAGGTCTACTGTTCACTCTAGTACAATTCCTCCTACTACGCAGCCATCTTTTGCTTCATACGAGAGCAAGCAAATGGTGGCAGAGGCATCAAAGATTTCGAGATCAGTAGAATCAAATTCTGGAAGTCAGTTAAGGAGTTCGCGACCTCCGCCAAGAGTGCCAGCAGCCAAACCAGGTCGAATAGTAGGGCCAGTTCTGCACTATGACAATGGGAGAACCATAAAAGATGCTTATGACCAAAGGATCTTCTACCGAAACTCACTTCCTCATGCCGTCTCTCCACACTGTTTCCATAGGGTGCAACCAGCTAACACCAAAGCTACATCAGAAACATACAAAGATATTTCACAAGGCAAACATCAACTCTCTTGCCAGCAGTGTAGCATGCCAGCCAGACCAGCTATTGATCTTAACACTAACCCATACTATCAACAGGGGAAGAGAGACCACTTAAATGATCCTGTTGGTTCCATTGATGCAAAACTGCTGCAGGCACAATCTCAATTTGGTGCAGTTGGTGCTGCAGCAGTAGCTGTTGCTGCTCATAGGCATTCAGGGAGCTTTCACTATGGATTGTCATAG	1020	0.4422	MEMRKKSPVPFEQKFSNADPLALRLLQRLLAFDPKDRPTAQEALSDTFFKGLAKVEREPSCQPISRLEFEFERRRVTKDEVRELIYREILEYHPQLLKDYMNGTEGTHFLYPSAIDQFRKQFAYLEENHGKSGPVIPPERKHVSLPRSTVHSSTIPPTTQPSFASYESKQMVAEASKISRSVESNSGSQLRSSRPPPRVPAAKPGRIVGPVLHYDNGRTIKDAYDQRIFYRNSLPHAVSPHCFHRVQPANTKATSETYKDISQGKHQLSCQQCSMPARPAIDLNTNPYYQQGKRDHLNDPVGSIDAKLLQAQSQFGAVGAAAVAVAAHRHSGSFHYGLS	339

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian11g01429	339	Gene3D	Transferase(Phosphotransferase) domain 1	2	72	-	-
	Vian11g01429	339	SUPERFAMILY	Protein kinase-like (PK-like)	8	93	IPR011009	-
	Vian11g01429	339	MobiDBLite	consensus disorder prediction	175	206	-	-
	Vian11g01429	339	Gene3D	Phosphorylase Kinase; domain 1	73	95	-	-
	Vian11g01429	339	MobiDBLite	consensus disorder prediction	175	193	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian11g01429	Vian-Chr11	24129463	24131181	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vian11g01429	2	336	MAP Kinase Gene Family	AT1G53510	54.986	1.28e-99	305

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian11g01429	-		-	gmx:100800878	575.089