Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01366 ATGGCTGCTCAATTGAAAAAGTCAGCTGCAGATGACATGAGGAAGAAGCTTCATGGTGATTCTCCAGGGGCTGAACTCAATACTTCCAATACGGTTCCCTCGAAGGGTGCAAGTTCCCCATCTGATGCAAGATCATGTGTATCATCGATAGGAGATGCTTCAGGTAGTGTTAAGGATGTTGATGTGGATCATGAGTACTTGTCCACAGATCAGGGTGGTCCTTATCCTGCTGGTGGCTATTATGGCTACTACTATCCAGGTTATGGTGGTTTCTTTGGAGAGTCAGACAACCAAGGGTACTATGTTGGTGCAGATGCCATGGATCTTCAATACCCTGTCATGCAAGCAGATAATGGATCTTATGTCTATCTCGTGCCAGGATTTCAGACTGGCTACCCTTCATACTTTCCTATAGGTACAGCTGGTGTTGAAGGACAGTATAATGTCTACCACCCTGGATCCATCTTTCAACACCCAATTGGATCACCTGGTTATTTACCAGCCTCTCTATCCTATGGAGAATTACCACCATCAACATACTCATGGGATTCTTCCCTGATCACACAAGATGGGTTTCAAGGACATGCTTATAATGATCTGGCTGGTAAACCAAATGGTAGATCTAATTTGTCTTCCCAGAGTCATTCTGGTGGTGTTGTATCAAAGTCTTCACCCTCATCTAACTCGGCAGAAGTGAAGGGTTCAACACCATTATTGGAGGTCACATCAACTCATGTTAAGAGAAACCAGCCAAAACAAACAAACAAAGCACCAGTTTCAGTCCTCCATTCACCTGTTTCCAAGTTTCCCACATACAATCAAGGAAAGAGTGGATTTCTCTATCCAAACAACTTGCTTAGTGTGAAAACCAATACAAAGGGCTGGGTTAGTACTGATAAGTTGAAAAACAGAAACAAGGTCAATGATTCATTTAATGAGCAGAATCAAGGTCCTAGAACAGCTAATGCAAAAGGTGCATTAGTGTCTGGAGGTAACCCTGTGAGAAACTTGGTCCTAGGTGGGAGTGGAAATGTTAGCAGTAAAATCAGGACAGATCAATACAACCTTCCTGATTTTCCAACCAAATATGACCATGCACTTTTCTTTGTCATCAAATCATACAGTGAAGATGATATCCACAAGAGCATCAAATACAACGTTTGGGCAAGTACTCCTAATGGGAACAAGAGGCTGGATGGTGCATATCAGGAGGCACAGAAGAGAATGGAAGAGAAAGGATGCAAGTGCCCTGTCTTCCTTTTCTTTTCGGTCAATGCTAGTGGTCAATTTTGTGGAGTAGCTGAGATGACTGGTCGGGTTGATTTCAACAAAAGTATGGATTTCTGGCAACAAGATAAATGGAATGGATACTTTCCTGTGAAATGGCACATTATAAAGGATGTTCCAAATCCTCAACTACGGCACATAATACTTGAGAATAATGATCACAAGCCCGTCACAAATAGTAGAGACACACAAGAGGTGAGTTTTCCCCAAGGTGTTGAAATACTCAACATTTTCAAGAACTATGTGGCAAGAACTTCCATATTGGATGACTTTGAGTTTTACGAAAGTCGCCAGAAGGTCTTGCAGGAGAAGAAAACAAGGCAATCTATTTCCCATACCAGTATACAGCATATAGATGAATTAACCACATCACTAGGGTCAGTAGAGCTATCATCATCATCATCATCTGTGAAGAACATGGAGGATCCTAAGGTAGTTGAGAAAGTGAAGGACTGA 1743 0.4205 MAAQLKKSAADDMRKKLHGDSPGAELNTSNTVPSKGASSPSDARSCVSSIGDASGSVKDVDVDHEYLSTDQGGPYPAGGYYGYYYPGYGGFFGESDNQGYYVGADAMDLQYPVMQADNGSYVYLVPGFQTGYPSYFPIGTAGVEGQYNVYHPGSIFQHPIGSPGYLPASLSYGELPPSTYSWDSSLITQDGFQGHAYNDLAGKPNGRSNLSSQSHSGGVVSKSSPSSNSAEVKGSTPLLEVTSTHVKRNQPKQTNKAPVSVLHSPVSKFPTYNQGKSGFLYPNNLLSVKTNTKGWVSTDKLKNRNKVNDSFNEQNQGPRTANAKGALVSGGNPVRNLVLGGSGNVSSKIRTDQYNLPDFPTKYDHALFFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDGAYQEAQKRMEEKGCKCPVFLFFSVNASGQFCGVAEMTGRVDFNKSMDFWQQDKWNGYFPVKWHIIKDVPNPQLRHIILENNDHKPVTNSRDTQEVSFPQGVEILNIFKNYVARTSILDDFEFYESRQKVLQEKKTRQSISHTSIQHIDELTTSLGSVELSSSSSSVKNMEDPKVVEKVKD 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01366 580 MobiDBLite consensus disorder prediction 204 261 - -
Vian11g01366 580 MobiDBLite consensus disorder prediction 308 322 - -
Vian11g01366 580 Pfam YT521-B-like domain 368 508 IPR007275 GO:0003723
Vian11g01366 580 MobiDBLite consensus disorder prediction 23 52 - -
Vian11g01366 580 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 97 543 IPR045168 -
Vian11g01366 580 MobiDBLite consensus disorder prediction 559 580 - -
Vian11g01366 580 Gene3D ph1033 like domains 343 522 - -
Vian11g01366 580 ProSiteProfiles YTH domain profile. 366 507 IPR007275 GO:0003723
Vian11g01366 580 MobiDBLite consensus disorder prediction 1 55 - -
Vian11g01366 580 MobiDBLite consensus disorder prediction 308 328 - -
Vian11g01366 580 CDD YTH 368 507 IPR007275 GO:0003723
Vian11g01366 580 MobiDBLite consensus disorder prediction 197 261 - -
Vian11g01366 580 FunFam YTH domain family 1, isoform CRA_a 345 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01366 Vian-Chr11 22517934 22521527 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01366 K20102 - gmx:100791190 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g01366 11 22517934 22521527 Vian11g01366 11 22517934 22521527 ECH