Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01359 ATGGGAACGCCTGTGAACATCATCGTTGGATCACAGGTTTGGGTTGAGGATCCTGAGGATGCATGGATTGATGGTGAGGTCACAGAAATCAATGGCAAAAATGTTAGCATCACTGCCACAAATGGGAAAACTATGGTGGCAGATATTTCAAGCATATACCCCAAAGATACAGAAGCACCACCTGCAGGAGTTGATGACATGACCAAGCTAGCTTACCTTCATGAGCCAGGAGTCCTGCATAACCTTGCAACTCGTTTTTCTCTCAATGAGATATATACATATACAGGGAATATCTTAATTGCAGTGAATCCTTTTAGAAGATTGCCACATTTGTATGACATCCATATGATGGGGCAGTACAAAGGTGCAGCATTTGGAGAGCTTAGTCCTCACCTTTTTGCTGTAGCTGACACATGTTACAGGTATGTTTTCATCGATGTAGAAATCTATTTTGCACAGGATGCCAAAAAGTACAAGTTAGGGGATCCAAGGCAATTCCACTATCTTAATCAATCAAACTGTTATGAAGTGTCAAATGTAGATGACGCAAAAGAATACTTGGAGACCAAAAATGCAATGGATATTGTGGGCATTAACCAAGAAGAGCAGGATGCTATCTTCCGTGTGGTAGCTGCAATCCTCCATCTTGGAAACATTGACTTTGTCAAAGGGAAAGATGTGGATTCTTCCAAATTGAAAGATGATAAATCACTCTTCCACCTACAAACAGCTGCGGAGTTATTCATGTGTGATGCAAAAGCACTGGAAGATTCACTTTGCAAGCGTGTCATTGTAACTCCTGATGGTAACATCACCAAACCTCTGGACCCTGATGCAGCTGCTTTGAGTCGAGATGCCTTGTCAAAGACTGTGTACTCCAAATTGTTTGATTGGATTGTGGACAAAATTAACAGTTCAATTGGTCAAGATTCCAATGCAGTAAGCATAATAGGAGTCCTTGACATTTACGGATTTGAAAGCTTCAAAATCAACAGTTTTGAGCAACTATGTATCAACCTAACGAATGAGAAGTTGCAACAACATTTTAATCAGCATGTATTCAAGATGGAGCAAGAAGAGTACACAAAGGAGGAAATCAATTGGAGCTATGTAGAGTTTGTGGATAATCAGGATGTTCTTGATCTTATCGAGAAGGTATTCTTCATCATCATTGCTTCTGAAAATATTTTTTCTATTAGATCAACTTATGAAACTATTTGTATGTCTATCATGCAGAAACCAGGGGGAATAATCGCTCTTCTAGATGAAGCCTGCATGTTCCCAAAATCAACTCATGAGACTTTTGCACAAAAGATGTACCAGACATATAAATCCCACAAGCGTTTCAGCAAGCCAAAACTTGCTCGAACAGATTTCACAATTAACCATTATGCTGGAGATAACCCTTTTGATGCACAGGTCACGTATCAAGCAGATTATTTTCTTGATAAAAACAAAGATTATGTTGTAGCAGAGCATCAAGCTCTATTATGTGCTTCCAAGTGCCCATTTGTTGCTAATCTTTTCCCTCCTTTACCAGAGGAAACTTCAAAGCAATCCAAATTCTCTTCCATTGGTTTACAGTTTAAGCAACAACTGCAATCTCTCATGGAGACACTGAATACAACAGAACCACATTACATACGATGTGTGAAACCAAATACAGTTTTGCAACCTGGGATCTTTGAGAACTTCAACGTCTTGAACCAATTAAGATGTGGGGGAGTACTTGAGGCAATAAGGATTAGTTGTGCGGGATATCCAACAAAAAGAACTTTTGAAGAGTTTCTTGATCGTTTTGGAATGCTTGCCCCCGATGTCCTTGATGGTTCTGATGAGAAAAAGGCCGCTATGGCCATCTGTGATAAGATGGGCTTAAAAGGCTATCAAATGGGAAAAACAAAGGTATTTCTCAGAGCAGGTCAGATGGCTGAAATGGATGCACGAAGAGCCGAAGTCTTAGCTAAAGCAGCTAAACTCATACAGAGACAAATCCGAACACATTTAACCAGAAAGGAGTTCATCACCCTAAGAAAGGCCACAATATATATCCAGAAGATGTGGAGAGCTAAACTTGCCCGTGAACTCTATGAACATATGAGGAGGGAAGCAGCTTCTATCCGGATACAGAAACATGTGCGTGCACACAGAGCAAGAATGTACTATACATCATTACAAGTATCAGCTATAGTTCTTCAATCAGGCTTGAGAGCATTTGCAGCACGAAATGAATATAGGTACAGAAGAAGAACAAAGGCTTCAACGAAAATTCAGACCCAATGGAGAAAAGTTCAAGCTCTTTCTGATTACAAACAGCAGAAGAAAGCAACTGTTTCACTACAATGTCTTTGGAGAGCTAAAATTGCAAGGAAAGAGCTCCGAAAGCTTCGGATGGCTGCAAGAGAAACTGGGGCACTTAAGGAGGCAAAGGACAAGCTGGAGAAGCGTGTTGAGGAGCTTACATGGAGAATAGATATTGAAAAGCACATGAGGATGGATCTTGAAGAAGCTAAAGGGCAAGAGATTGCAAAATTGCAAAATGCATTACAAGAAATGCAAGCTCAGCTAGATGAAGCCCAGGCAGCAATTATACATGAGAGAGAAGCAGCAAAAATAGCAATTGAACAAGCACCACCTGTAATTAAAGAGGTACCTGTTGTGGACGATACAAAGCTAGAGTTACTGACAAATAAAAATGAGGAGCTGGAGACTGAAGTGGAAGAGCTTAACAAGAAGATTAAAGAGTTTGAAGAGAAATTCTCAGAAATTGAAAACGAGAATCAATCAAGGGTGAAAGAGGCGGAAGAAGCACACGTTAAAGCAACACAACTTCAGGAGACCATTGAAAGATTGGAATTGAGTTTGTCAAACCTGGAGTCTGAGAACCAGGTTCTATGCCAGCAGGCTTTGGAAGAATCAAAAAATGAAGAACTCTTTGAAGAGATCAAAATCCTCAAGGGTCAGATAGCAAATCTAGAATCAGAGAATGAATCCCTACGGAGCCAGGCAGAAGCAGCTGCTGCTTTAGAGCAGAAAGTCCATCCAGAGAAAATAGAAACAGACCATTCAGCAGCTGCTTTAGAGCAGAAAGTTCATCCAGAAAAAAATGAACCAGACCCTGAAGTTGCTGTTGTAGAGAAGATCAAAGTGCAACCAAGAGTTATTGCAGATAATGTGACTGCCCAAATCAAGGAATCAAAAGCACCGCTCTTCTTGCTTACTAAACAAAGATCACTCACAGACAGACAGCAGGAAAGTCATGATGCACTGCTCAAGTGTCTCGCTGAAGATAAGCGATTTGAGAAAAACAGACCAGCAGCTGCTTGTATTGTATATAAAGCACTTCTTCATTGGAGATCCCTTGAAGCAGAAAAAACACATATTTTTGATAAAATTACACACACTATCCGATCATCTATAGAGAGTCAAGAAGGAATCCATGATCTAGCCTACTGGCTTTCAACTATTTCAACACTTCTGTTTTATCTACAATGCACAATGAAGGCCAGCAATACAACTAAGGCAGTGTCACGTAATCGAAACTCCCCTGCCACTTTGTTTGGAAAAATGGCACAAGGTTTGCGTTCATCTTCAATGGGCTTGGGGATTTCAAGTGGCTACAGTGGAATGGTGGAGAAGCCAAATGATCAGTCTAAAGTAGAAGCCAAATATCCAGCTATTCTGTTTAAGCAGCATTTAACTGCATATGTGGAGAAGATATATGGAATGATCCGTGACAGTCTAAAGAAAGAGATTAGCCCATTCTTAAATTTGTGTATACAGGCACCAAGATCCATAAGAACTAGATCAATAAGAGGATCATCCAGAAACATCCATTCAAATATTGTTGCAAAACAGCAAGCATTACATATGTACTGGAAGGGAATCGTGGACAAGTTAGATCATGCCTTGCGTATATTGTCCGATAACTATGTCCCTCCCATCATTACAAGAAAGATATTTAGTCAGGTTTTCTCATTCATGAATATCCAGCTATTTAATAGTTTGTTGCTTCGTCGTGAGTGCTGTTCCTTTAGCAATGGAGAATATTTGAAGGCAGGATTGCATGAGTTGGAACTATGGTGTCTTAAAGCAACAGACCAGGGGTTAAGTATTCCACAAATATATCGTATTGGAACTATGTTCTGGGATGACAAGTATGGAGCACAGGGATTATCTGCAGAAGTCATTAGCAGAATGAGAGTGATTATGACAGAAGACTCAATAAGCATACATAATAGCTCATTCCTTCTAGAGGTGGATTCCAGCATACCATTCTTGATGGAGGAGATGTTTCGCTCCATGAGTGACATCCGCCTATCAGACATGGATGTGGATCCACCGCCAATACTCAGGCAAAGGTCTGACTTCCATTTCTTGTTGCAACAAATGGACAGTGACTCTCAGGGCCATGCTAATCTTCTCTGTATCGTTCCAATTTTATCGGATGTCCCCGAAGGGACAATGTTACAACGAGGCTATGGAATTATAAACAATTGA 4500 0.4038 MGTPVNIIVGSQVWVEDPEDAWIDGEVTEINGKNVSITATNGKTMVADISSIYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLATRFSLNEIYTYTGNILIAVNPFRRLPHLYDIHMMGQYKGAAFGELSPHLFAVADTCYRYVFIDVEIYFAQDAKKYKLGDPRQFHYLNQSNCYEVSNVDDAKEYLETKNAMDIVGINQEEQDAIFRVVAAILHLGNIDFVKGKDVDSSKLKDDKSLFHLQTAAELFMCDAKALEDSLCKRVIVTPDGNITKPLDPDAAALSRDALSKTVYSKLFDWIVDKINSSIGQDSNAVSIIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKVFFIIIASENIFSIRSTYETICMSIMQKPGGIIALLDEACMFPKSTHETFAQKMYQTYKSHKRFSKPKLARTDFTINHYAGDNPFDAQVTYQADYFLDKNKDYVVAEHQALLCASKCPFVANLFPPLPEETSKQSKFSSIGLQFKQQLQSLMETLNTTEPHYIRCVKPNTVLQPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFEEFLDRFGMLAPDVLDGSDEKKAAMAICDKMGLKGYQMGKTKVFLRAGQMAEMDARRAEVLAKAAKLIQRQIRTHLTRKEFITLRKATIYIQKMWRAKLARELYEHMRREAASIRIQKHVRAHRARMYYTSLQVSAIVLQSGLRAFAARNEYRYRRRTKASTKIQTQWRKVQALSDYKQQKKATVSLQCLWRAKIARKELRKLRMAARETGALKEAKDKLEKRVEELTWRIDIEKHMRMDLEEAKGQEIAKLQNALQEMQAQLDEAQAAIIHEREAAKIAIEQAPPVIKEVPVVDDTKLELLTNKNEELETEVEELNKKIKEFEEKFSEIENENQSRVKEAEEAHVKATQLQETIERLELSLSNLESENQVLCQQALEESKNEELFEEIKILKGQIANLESENESLRSQAEAAAALEQKVHPEKIETDHSAAALEQKVHPEKNEPDPEVAVVEKIKVQPRVIADNVTAQIKESKAPLFLLTKQRSLTDRQQESHDALLKCLAEDKRFEKNRPAAACIVYKALLHWRSLEAEKTHIFDKITHTIRSSIESQEGIHDLAYWLSTISTLLFYLQCTMKASNTTKAVSRNRNSPATLFGKMAQGLRSSSMGLGISSGYSGMVEKPNDQSKVEAKYPAILFKQHLTAYVEKIYGMIRDSLKKEISPFLNLCIQAPRSIRTRSIRGSSRNIHSNIVAKQQALHMYWKGIVDKLDHALRILSDNYVPPIITRKIFSQVFSFMNIQLFNSLLLRRECCSFSNGEYLKAGLHELELWCLKATDQGLSIPQIYRIGTMFWDDKYGAQGLSAEVISRMRVIMTEDSISIHNSSFLLEVDSSIPFLMEEMFRSMSDIRLSDMDVDPPPILRQRSDFHFLLQQMDSDSQGHANLLCIVPILSDVPEGTMLQRGYGIINN 1499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01359 1499 Pfam Myosin N-terminal SH3-like domain 10 50 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vian11g01359 1499 ProSiteProfiles IQ motif profile. 725 754 IPR000048 GO:0005515
Vian11g01359 1499 SMART DIL_2 1319 1388 IPR002710 -
Vian11g01359 1499 FunFam unconventional myosin-Va 705 752 - -
Vian11g01359 1499 Coils Coil 975 1012 - -
Vian11g01359 1499 ProSiteProfiles IQ motif profile. 654 681 IPR000048 GO:0005515
Vian11g01359 1499 SMART MYSc_2a 56 652 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian11g01359 1499 Gene3D - 752 801 - -
Vian11g01359 1499 Gene3D - 705 751 - -
Vian11g01359 1499 Gene3D - 652 704 - -
Vian11g01359 1499 Pfam Myosin head (motor domain) 64 143 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian11g01359 1499 Pfam Myosin head (motor domain) 405 639 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian11g01359 1499 Pfam Myosin head (motor domain) 152 386 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian11g01359 1499 ProSiteProfiles Myosin motor domain profile. 62 651 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian11g01359 1499 Coils Coil 796 869 - -
Vian11g01359 1499 Gene3D Kinesin motor domain 12 151 IPR036961 -
Vian11g01359 1499 Gene3D - 153 197 - -
Vian11g01359 1499 FunFam unconventional myosin-Va 753 800 - -
Vian11g01359 1499 ProSiteProfiles Dilute domain profile. 1130 1467 IPR002710 -
Vian11g01359 1499 FunFam unconventional myosin-Va 656 704 - -
Vian11g01359 1499 SMART iq_5 772 794 IPR000048 GO:0005515
Vian11g01359 1499 SMART iq_5 676 698 IPR000048 GO:0005515
Vian11g01359 1499 SMART iq_5 653 675 IPR000048 GO:0005515
Vian11g01359 1499 SMART iq_5 701 723 IPR000048 GO:0005515
Vian11g01359 1499 SMART iq_5 749 771 IPR000048 GO:0005515
Vian11g01359 1499 SMART iq_5 724 746 IPR000048 GO:0005515
Vian11g01359 1499 Pfam IQ calmodulin-binding motif 656 674 IPR000048 GO:0005515
Vian11g01359 1499 Pfam IQ calmodulin-binding motif 678 697 IPR000048 GO:0005515
Vian11g01359 1499 Pfam IQ calmodulin-binding motif 728 746 IPR000048 GO:0005515
Vian11g01359 1499 Pfam IQ calmodulin-binding motif 775 794 IPR000048 GO:0005515
Vian11g01359 1499 Pfam IQ calmodulin-binding motif 704 722 IPR000048 GO:0005515
Vian11g01359 1499 FunFam Myosin 2 199 316 - -
Vian11g01359 1499 Pfam DIL domain 1320 1365 IPR002710 -
Vian11g01359 1499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 705 IPR027417 -
Vian11g01359 1499 ProSiteProfiles IQ motif profile. 750 779 IPR000048 GO:0005515
Vian11g01359 1499 Gene3D Myosin VI head, motor domain, U50 subdomain 199 521 - -
Vian11g01359 1499 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vian11g01359 1499 ProSiteProfiles IQ motif profile. 773 802 IPR000048 GO:0005515
Vian11g01359 1499 ProSiteProfiles IQ motif profile. 677 706 IPR000048 GO:0005515
Vian11g01359 1499 Gene3D Kinesin motor domain 310 582 IPR036961 -
Vian11g01359 1499 PANTHER MYOSIN 152 1392 - -
Vian11g01359 1499 ProSiteProfiles IQ motif profile. 702 728 IPR000048 GO:0005515
Vian11g01359 1499 Coils Coil 892 968 - -
Vian11g01359 1499 Gene3D - 587 649 - -
Vian11g01359 1499 Gene3D - 326 543 - -
Vian11g01359 1499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 706 802 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01359 Vian-Chr11 22344724 22358400 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01359 153 1464 Myosins gene family AT2G31900 66.421 0.0 1815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01359 K10357 - gmx:100817933 2206.79