Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01357 ATGGTTGAACACAGATCGGAAGCCATAGGAACAGTGAAGGGGTTTAAAGAGGGTAAGTGTTATTTTGATTTGGCTCATTCATTACACTTCGTCTGCGTGGTTGACCAGTTAGCAGAGTCAAAACCCTGCAGACAGTACAAAATGATGCCAAGCAATGGACAGTTAACAGTTCCTCCTGGCTTCAGGTTCCACCCTACCGATGAAGAGCTTCTCTACTATTACCTGAGGAAGAAAGTTTCTTATGAAGCCATTGACCTTGATGTCATAAGAGAAGTGGATCTCAACAAACTTGAGCCTTGGGACCTCAAAGACAAATGTAGGATTGGGTCAGGGCCTCAGAATGAGTGGTACTTCTTCAGCCACAAGGATAAGAAATACCCAACAGGAACAAGAACAAATCGAGCAACTACAGCAGGTTTTTGGAAAGCAACTGGAAGAGACAAATCCATATACCACACTAATTCCAAGAGGATTGGCATGAGGAAAACCCTAGTTTTCTACACTGGTCGTGCTCCTCACGGCCAGAAGACTGATTGGATCATGCATGAGTATCGCCTTGATGAAGATGATGCGGATGTTCAGGAAGATGGATGGGTGGTATGCAGGGTTTTCAAAAAGAAAAACCAAAATCGAGGTTTCCAGCAAGAAATTGAAGAAGAAGAGAACTTAACCCACATGAGAACAAGTGGTCCTTGTCATGTTCTGGAGCCAAAACATCATATGCAAGGAGGATTATATGACTACAACTTTGATGGCACAATGCAGCTTCCACAGTTGTTCAGTCCAGAATCAGCTGCTGCACCAAGCAGTAGTTGCTTGGGCACATCCATGAATGCCATGGACATCCTTGAGTGCTCTCAAAACTTGTTGAGGCTCACCACTAGTGGCTGTGGACTGAATCTTATGCAACAACAGGGAGAGAGATTCAGTGGTGATTGGTCATTCTTGGACAAGCTACTAGCATCTCACCATGCCATGGATCATCAGCATCATCCACAAAGCAAATGTAACCCTCCCACTCACCAAGCTGCAACTTCTGTTGCCACTTCAGCTCAGAAATTCCCATTCCATTATCTTGGCTGTGACACCCATGATATCATGAAATTTTCCAAGTAG 1116 0.4435 MVEHRSEAIGTVKGFKEGKCYFDLAHSLHFVCVVDQLAESKPCRQYKMMPSNGQLTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNKLEPWDLKDKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKSIYHTNSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLDEDDADVQEDGWVVCRVFKKKNQNRGFQQEIEEEENLTHMRTSGPCHVLEPKHHMQGGLYDYNFDGTMQLPQLFSPESAAAPSSSCLGTSMNAMDILECSQNLLRLTTSGCGLNLMQQQGERFSGDWSFLDKLLASHHAMDHQHHPQSKCNPPTHQAATSVATSAQKFPFHYLGCDTHDIMKFSK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01357 371 ProSiteProfiles NAC domain profile. 57 206 IPR003441 GO:0003677|GO:0006355
Vian11g01357 371 Pfam No apical meristem (NAM) protein 58 186 IPR003441 GO:0003677|GO:0006355
Vian11g01357 371 FunFam NAC domain-containing protein 66 210 - -
Vian11g01357 371 Gene3D NAC domain 66 211 IPR036093 GO:0003677|GO:0006355
Vian11g01357 371 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 56 305 - -
Vian11g01357 371 SUPERFAMILY NAC domain 45 206 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01357 Vian-Chr11 22306650 22312614 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01357 53 371 NAC Transcription Factor Family AT1G79580 53.191 7.02e-116 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vian11g01357 NAM 2.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01357 - - vun:114178728 649.432