Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01304 ATGTGGAAATTTAAGCCATTTGGCCACAAAGAGCAGACTGGTCTTGAAGGCCGCACTGTAGATGTTGGTAATCTTAAAATAAACATTGTTAAGGCCATTGCGGAAGGAGGGTTCTCTTGTGTCTACCTAGCTCGTGATGCTGTACATATGTCAAAGCAATATGCCTTGAAGCACATAATATGCAATGATGAGGAATCACTCGGACTGGTAAAGAAGGAGATATCTGTGCTTAAGATGCTGGTAGGACATCCCAATGTTGTCACACTTCATGCACATGCCATCTTTGATATGGGTAGGACAAAGGAGGCATTCCTTGTGATGGAATTTTGTGAGAAGTCTCTGGTCAATGTGCTGGAGAGCCGCGGAGCTGGTTATTTTGATGAGACACAGGTTCTTTTGATCTTCAGGGATATCTGTAATGCAGTTTTTGCTATGCATTGCCTGTCCCCACCTATTGCACACCGGGACTTGAAAGCGGAGAATCTTTTATTAAGTTCAGATGGCTTATGGAAGTTATGTGATTTTGGAAGCACTTCCACAAATCACAAACGTTTTGAAAAGCCAGAAGAAATGGGGATTGAGGAAGACAATATCCGGAAGTATACAACTCCAGCCTACAGGGCCCCTGAGGGTTCTATCCTTGGATTGGCCTTGTGGTGGACACTAGACGGGTTTGATTTGGTTCTTTCTGGGGTTAAGTGTATGTGGGATCTGTTCCTGAGAGAGGTCATTAATGAGAAGGTAGACATATGGGCTCTTGGATGTCTTCTTTTTCGAATATGCTACTTCAAAAGTGCATTTGATGGGGAATCAAAGCTTCAAGTCTTAAATGGAAACTACCGTATTCCCGATTTACCGAAATACAATTCATCTATCACGGACTTGATAAGAGACATGCTCCAAGCTAGACCAGATGACAGACCAGATATCACGCAGGCAAGCGCTTTGCTTGATTGGCCATTCTTCTCCATCAGTTTAGGTATCTCAATGCCCTCAAACAGATCACCTCCAATGCCTCGTAGGAACCCGCCTCCTCCGCCTTCATCCGGAGAACCCAAGACTACACCACAGCCATCCCTTGCTTCTAGGGGAGGGGGCAGTGGGGGGCAGCTTGGTGCTTTCTGGTCCAGTCAGCACGCAAAGGATCCACTTGTCACTGAGGACAAGAGCAAGCCAATTTTTGATGAAGAACCATCCAGTCACCATATGCCACTGAAACATGATAGATTTCGTCCTGAAAATGAACAATTAGCCAAAAATGTTAGTACTAGCAAAGTGGTTAATGCACAAACTCATACTGTGAAAAGCAGTACACATGGAAAATTAAACAAGCCTGATACCAAACCCTCGAAGGATTTTGAGATAAACTTATTCCAAGATAAAGATCGAATGGAGAATACGGCTAACTTTCAGAACCAGGCTTTTAACTCTTTTGTTGCTGAATTCGATACCACTAAGCTCAACACTGGACTTAATAACAAATCCGAAAGGGAACAAGCATTAGAGGCTGAAGTGGAGAAACTCAAAGAGCAGCTGAAGGAAGCTAACGTGGAAAAAGCTGAAATAACCTCAAAGTTTGAAAAGCTTTCTGCTATCTGCCGATCCCAGAGGCAAGAATTGCAGGATCTCAAGCAAGCACTGGCAGGTCGGACTCCTTCACCAAGCAGAGAGGGTTTGAAAACCTCTCCTGCAATTACATCATCTGCACCTATGCAGGATAGAACTGAATGGAAAACTCCCAGTTCAGAACCTAAGTCATGGCAAGCTTTTCCTGAGGAACCCCAACAACAGAAGTCCCTTTCAGCAGGAAATACTACCAAATCAGTCAGGACAAATAATGGCAGGCAAAACAAGCAACCTGTTCAACTGGCTACTAATTTTGATTCATGGGGTTTTGGAACTGATAGCTTCAGTGCTGTACCTACTGGCAGCTCACAGATGCAAAGATCTAGCAGTGCCGGAGGTAAGTCTCAGGGCTTTGATGAGGCAAAGACCTTTGAGAGCAAACCAACTTCTCAACCAGCTGGTTGGGCTGGTTTTTAA 2043 0.443 MWKFKPFGHKEQTGLEGRTVDVGNLKINIVKAIAEGGFSCVYLARDAVHMSKQYALKHIICNDEESLGLVKKEISVLKMLVGHPNVVTLHAHAIFDMGRTKEAFLVMEFCEKSLVNVLESRGAGYFDETQVLLIFRDICNAVFAMHCLSPPIAHRDLKAENLLLSSDGLWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKYTTPAYRAPEGSILGLALWWTLDGFDLVLSGVKCMWDLFLREVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKYNSSITDLIRDMLQARPDDRPDITQASALLDWPFFSISLGISMPSNRSPPMPRRNPPPPPSSGEPKTTPQPSLASRGGGSGGQLGAFWSSQHAKDPLVTEDKSKPIFDEEPSSHHMPLKHDRFRPENEQLAKNVSTSKVVNAQTHTVKSSTHGKLNKPDTKPSKDFEINLFQDKDRMENTANFQNQAFNSFVAEFDTTKLNTGLNNKSEREQALEAEVEKLKEQLKEANVEKAEITSKFEKLSAICRSQRQELQDLKQALAGRTPSPSREGLKTSPAITSSAPMQDRTEWKTPSSEPKSWQAFPEEPQQQKSLSAGNTTKSVRTNNGRQNKQPVQLATNFDSWGFGTDSFSAVPTGSSQMQRSSSAGGKSQGFDEAKTFESKPTSQPAGWAGF 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01304 680 MobiDBLite consensus disorder prediction 431 452 - -
Vian11g01304 680 MobiDBLite consensus disorder prediction 546 680 - -
Vian11g01304 680 MobiDBLite consensus disorder prediction 555 672 - -
Vian11g01304 680 Pfam Protein kinase domain 30 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g01304 680 ProSiteProfiles Protein kinase domain profile. 27 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g01304 680 MobiDBLite consensus disorder prediction 331 374 - -
Vian11g01304 680 Gene3D Transferase(Phosphotransferase) domain 1 10 320 - -
Vian11g01304 680 SMART serkin_6 27 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g01304 680 SUPERFAMILY Protein kinase-like (PK-like) 27 323 IPR011009 -
Vian11g01304 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Vian11g01304 680 MobiDBLite consensus disorder prediction 336 353 - -
Vian11g01304 680 Coils Coil 491 546 - -
Vian11g01304 680 PANTHER SERINE/THREONINE PROTEIN KINASE 1 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01304 Vian-Chr11 21393781 21397114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01304 26 310 Miscellaneous Gene Families AT2G34180 28.136 1.99e-17 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Vian11g01304 Pkinase 5.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01304 K08853 - gmx:100808507 1041.18