Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01246 ATGAAGGAATGGAAATGGAGTCTGGTCCTCCTCCCAACGATCTCTGTTCAATCTGCCATGCCAACTTTCACATTCCTTGCCAAGCCAATTGCTCTCACTGCAAATTGCATCATGCTCGTGTGGCAGCACGCATCAGGAACAAGTTGTTGCAAATGCCCTCTCTGTCGCCGACCCATCACTCTCTTAATCCCCACCGAACACTCTCTCAGCCAGCGTCATGACCCTGAAGTTGCTCAGATTCTCTCCAAAATTCATGCTTATAACCGTGTCTTCGGTGGCCAACCTTCCTCTTTTTTTCAGAGAGTGCAAGATCTTCCTTTTCTGTTGCACAGGCTGCTTCGGGAGTTCCTAAACCCTCAAAGATCCCTTCCTCTTGTCATCCGTGCCCGTGTCTTTGTTGCTATGATTGCAAGTGTTGTATACATCCTGAGCCCAATTGACCTCATTCCTGAAGCTATATTAGGAATAGTTGGTCTCTTAGATGATGTCTTAATTGGGCTCATCTGCTTCCTACATGTTGCTGCCCTTTATAGATCAGTTCTTTACCTCCGTCATGCCGGTTCCTGA 567 0.4727 MKEWKWSLVLLPTISVQSAMPTFTFLAKPIALTANCIMLVWQHASGTSCCKCPLCRRPITLLIPTEHSLSQRHDPEVAQILSKIHAYNRVFGGQPSSFFQRVQDLPFLLHRLLREFLNPQRSLPLVIRARVFVAMIASVVYILSPIDLIPEAILGIVGLLDDVLIGLICFLHVAALYRSVLYLRHAGS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01246 188 Pfam Protein of unknown function (DUF1232) 133 165 IPR010652 -
Vian11g01246 188 PANTHER UNCHARACTERIZED 34 185 IPR038896 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01246 Vian-Chr11 20313829 20315111 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01246 38 188 C3H Transcription Factor Family AT1G72175 67.550 3.01e-63 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01246 K15707 - gmx:100306204 252.292