Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01235 ATGGAATCTCAATTAGTTGACAGAAATGATGCTATGGAAGTTTCTGGGAATATGGATTTGATTACATATGAAGTTCAGGTAGATCAAGAAACATATGAAGTGGATCCAAACGAGGGGTGTAGAGTACTAGAGACTTCTTCTGGGGGAGAGTTGGGTATCTGTGATGATGATCATGCTATTCAGGAACCATATGAAGGCATGGAGTTTGAATCTGAAGATGCTGCTAAGATATTCTACGACGAATATGCACGACGTGTAGGATTTGTCATGCGTGTGATGTCATGCAGACGCTCAGAAAGGGATGGAAGGATTCTTGCCCGCAGGCTTGGGTGCAACAAAGAGGGTTATTGTGTCAGCATCCGAGGGAAATTTTCATCAGTTCGTAAACCTAGGGCCAGCACAAGGGAAGGGTGTAAGGCAATGATTCACATCAAATATGAGAAATCTGGAAAATGGGTGATAACAAAGTTTGTGAAGGATCATAATCATCCATTAGTAGTCTCTCCTCGTGAAGCACGCCAAACAATGGATGAGAAGGATAAGAAAATTCAGGAATTAACAGCAGAGCTTCGGCATAAAAAACGGTTGTGTGCGACATATCAAGAACAACTTACTTCCTTTATGAAGGTTGTTGAAGAGCACAATGAAAAGCTATCTACGAAAATTCATCGTGTAGTTAATAATCTCAAAGAATTTGAATCCATAGACGAGATTTTGCACCAAACATAG 729 0.406 MESQLVDRNDAMEVSGNMDLITYEVQVDQETYEVDPNEGCRVLETSSGGELGICDDDHAIQEPYEGMEFESEDAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFSSVRKPRASTREGCKAMIHIKYEKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQELTAELRHKKRLCATYQEQLTSFMKVVEEHNEKLSTKIHRVVNNLKEFESIDEILHQT 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01235 242 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 33 234 - -
Vian11g01235 242 Pfam FAR1 DNA-binding domain 78 166 IPR004330 -
Vian11g01235 242 Coils Coil 176 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01235 Vian-Chr11 20125073 20127391 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vian11g01235 FAR1 4.1e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01235 - - pvu:PHAVU_005G002900g 477.248