Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01215 ATGGAAAGTGAAAGAGAGGACAACAACAACGGCACTGATTCAACACACGCTGCCATCTCTAGCACACTCAAAATTAAGATTTTGAGCTGCAGCAAAAGTGGGGAGAGTTTAGACAACTCAAACTTACCTTCACCAAACATAAACAATGGCACAGAGTCATCACCATATGGTTCTCCTCTTGTGTCACCACCTTCATCAGCATTTGTTTCTGCATTGCAGTCTCCATATATATCTCCAAGGGCCATTATACCAGACCCACCTAACGGATCTCCTTTGGAAAACCAACCACCACTACTGACAATAACCACTTCCACCACCAACCCTTCCACCCCTGAAGATGTGCCTAGCAGTTCCTACACTCCCCCTTCTGATCAATATGAGTTCTCTGATGACCCTGCTGACACAAGGCTAAAGTATGTGACATGTGTTCCTGAACCGGCTCCTCCACGCATTTCATTCTCATTTCCAGTCCCTAGAATTTCCTTTGCAAAAGGTCCTATCTCACCTGCTACCAATGCCAAACTCAGAAGCTGTGATGTCTATATTGGATTCCATGGCCAGAACCCCAACTTGGTGCGCTTCTGCAGGTGGCTTAAGTCTGAGCTTGAGCTTCAAGGGATCGATTGCATGCTTGCTGATAGAGCAAAGTACTCAGACAGTCAGAGTCACGAGATTGCTGATGGAGTCATTTGCTCAGTGGCTTTTGGAGTGGTGGTTGTCACAAGTTCCAGCTTCCTCAACCATTTTAGCATGGAGGAGGTGAGATTCTTTGCTCAAAAGAAGAACTTGATTCCCCTCTTGTTTGACACTGGACCTGCAGAGATTATGGCTCTTCTTAACTGCAAATCAATTGACAAAGAATGTAAAGAGGCAATAGATGGACTTATGAAGTGCAATGAATTCAATATAGAGGCCAATGATAGTAATTGGCGAAGCTGCATAGCGAAAGCTGCGGGTATTTTAAGAGCAAGACTTGGTAGGAAGAATGCTGAGCAGAAGGATAATGTACAAGGACTTGGGAACTTACCCTTTCCAAGGAACACATACTTTGTAGGAAGAGAGAAGGAGATTATGGAGATTGAGGGTCTTTTTTTCGGTCGAGGGAATTGCATGGAACAAGTACAAGATCATTGTAGGGTATTCACCAAAGGAGAAGCTAGTGGAAGTGGACAATCTGAAGGCCTTGCAGATGAGGAAAGTGAACCAGTGATAGCAAGGTGTGGGAGGTATATCAGTCTAGAGATGGGGAGAAGCAAAGAACCAACTTTAGAGGCTTGGGTTGAACCGATCATGGGAAACAACTCTTTGAAGAGGTTGAAGAATAAGAAGTCAAAGAGTGGAAGCTACAAGAGCGTGTGTAGCAGTGTGATTTGCATTAATGGGGTTTCTGGGATTGGAAAGTCAGAGCTGGCACTAGAATTTGCTCATAGATACCACCAGAGGTATAAAATGGTTTTGTGGGTTGGTGGTGAAGCCAGGTATCTGAGGCAGAACTTATTGAACTTGTCTCTGAATTTGGGACTGGATGTTGGTGCTGATTCTGAAATGGAAAGGGGTAGGATTCGTAGCTTTGAGGATCAAGAATTTGAGGCATTCAAGAGAGTGAAGAGGGAACTGTTTGGTGAGACTCCTTACTTGCTGATAATTGACAATCTTGAGACAGAAGTGGAATGGTGGGAAGGGAAGGATCTGTATGACTTGATACCAAGAAACACAGGAGGAACACACGTGATTGTTACAACAAGATTGTCCAAAGTAATGAGCTATGATACAATTCAGCTTCCACCTTTGCCATTATCTGATGCAATGATTCTGATGATAGGAAGAAAGAGGAAAGAGTATTCCGCAGATGAGATAGACCTGCTTGAAAAAATCAATGAGAAACTTGGAAGGTTGAGCATTGGTTTGTGGATGATTGGTTCACTGTTGGCTGAACTTTCAATAGGCCCTTCTTGTCTCTATGAGGCCATTAACCAGGTGCCACTCGATGAAGATTCAAACTCTTGCTACATGAGCATTGCAGAAGGGCAATGGTGCAAGAGCAACCCTTTTCTCATGAAGACCCTTCTCTTTTGTTTGGAAACTTTGGAGAAAACTAAAGCTAAAGGGAACCTCTTGGCCTTAAGAATGCTGCTTGTAAGTGGCTGGTTTTCCCCCTCTCCCATTTCATCCACTTTATTGGCCAATGCAGCAAAGAGTATTCCTACAGTAGAAAGCCGTCTAAAGAAGTGGACCAAATCTCTGAGCCTAACAACAAGTTGTTTATCACCACGGACGTGGAAAAATGAAGAAGAACCAGCAATGATTCTTGTGAAAATGGGACTAGCTAGAAGGGCTAATCAACATGATGGATGTTGGCTTCATTTCCACCCCATAACACAAGCATTTGCCAAAAGAAAAGGTGGTTTGCAATATGCCAAGGCTGCAATTCAAGGAGTGAGGAAAATGGGAAGCCAAGTTAACTCAGATCATTTATGGGCCTCAGCGTTCCTTGTTTTTGGGTTCAAATCGGAGCCTCCCCTGGTGCAGCTGAAGGCAATTGACATGGTTTTGTACATCAAGAGAACAGCTCTTCCTCTAGCAATTCAAGCCTTCACCATTTTCTCAAGATGCAACTCATCCTTGGAGCTCTTGAGGGTGTGCACCAATGCTCTTGAGGAAGTTGAGAAGTCTTTTGTGTCTCAAATCCAAGATTGGTCTTCCCATGGTTCAGTTTGTTGGAAAAGGAGGCTGCAAAGAGGCCAAAAAGTAGATGAATATGTGTGGCAGGATGTGACCTTGTTGAAGGCAACACTACTGGAGACAAGAGCAAAGTTGCTAGCAAGAGGAGGGCATCTAGACAGTGCCAAGGAACTGTGCAGAACATGCATCAGTATCAGAACTGTGATGCTTGGCCATAACCATGCACAGACCTTGGCTGCTCAAGACACATTGGCAAGGTTGGTCAGAATGAGGAGCAAGATATGA 2967 0.4415 MESEREDNNNGTDSTHAAISSTLKIKILSCSKSGESLDNSNLPSPNINNGTESSPYGSPLVSPPSSAFVSALQSPYISPRAIIPDPPNGSPLENQPPLLTITTSTTNPSTPEDVPSSSYTPPSDQYEFSDDPADTRLKYVTCVPEPAPPRISFSFPVPRISFAKGPISPATNAKLRSCDVYIGFHGQNPNLVRFCRWLKSELELQGIDCMLADRAKYSDSQSHEIADGVICSVAFGVVVVTSSSFLNHFSMEEVRFFAQKKNLIPLLFDTGPAEIMALLNCKSIDKECKEAIDGLMKCNEFNIEANDSNWRSCIAKAAGILRARLGRKNAEQKDNVQGLGNLPFPRNTYFVGREKEIMEIEGLFFGRGNCMEQVQDHCRVFTKGEASGSGQSEGLADEESEPVIARCGRYISLEMGRSKEPTLEAWVEPIMGNNSLKRLKNKKSKSGSYKSVCSSVICINGVSGIGKSELALEFAHRYHQRYKMVLWVGGEARYLRQNLLNLSLNLGLDVGADSEMERGRIRSFEDQEFEAFKRVKRELFGETPYLLIIDNLETEVEWWEGKDLYDLIPRNTGGTHVIVTTRLSKVMSYDTIQLPPLPLSDAMILMIGRKRKEYSADEIDLLEKINEKLGRLSIGLWMIGSLLAELSIGPSCLYEAINQVPLDEDSNSCYMSIAEGQWCKSNPFLMKTLLFCLETLEKTKAKGNLLALRMLLVSGWFSPSPISSTLLANAAKSIPTVESRLKKWTKSLSLTTSCLSPRTWKNEEEPAMILVKMGLARRANQHDGCWLHFHPITQAFAKRKGGLQYAKAAIQGVRKMGSQVNSDHLWASAFLVFGFKSEPPLVQLKAIDMVLYIKRTALPLAIQAFTIFSRCNSSLELLRVCTNALEEVEKSFVSQIQDWSSHGSVCWKRRLQRGQKVDEYVWQDVTLLKATLLETRAKLLARGGHLDSAKELCRTCISIRTVMLGHNHAQTLAAQDTLARLVRMRSKI 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01215 988 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 346 660 IPR027417 -
Vian11g01215 988 PANTHER DNA REPAIR PROTEIN RADA 53 983 - -
Vian11g01215 988 Pfam NB-ARC domain 437 588 IPR002182 GO:0043531
Vian11g01215 988 Gene3D - 163 294 IPR035897 -
Vian11g01215 988 SMART AAA_5 453 611 IPR003593 GO:0016887
Vian11g01215 988 MobiDBLite consensus disorder prediction 80 130 - -
Vian11g01215 988 MobiDBLite consensus disorder prediction 33 65 - -
Vian11g01215 988 MobiDBLite consensus disorder prediction 94 125 - -
Vian11g01215 988 Gene3D - 432 593 IPR027417 -
Vian11g01215 988 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 159 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01215 Vian-Chr11 19910068 19913034 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01215 - - gmx:100781208 1742.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g01215 11 19910068 19913034 Vian11g01215 11 19910068 19913034 ECH