Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01187 ATGACCAACTTTTCGATTCTCCTTCTCCTTGTTCTCTGCGCCCTCCAGAGTTGCTTCGCCGCCTCCAACCCCTCCAACTTCATAAAATCCTCCTGCAGCACCACCCAGTACCCCGCCCTCTGCGTGGAGTCGCTATCGGTGTACGCCGCCGCCATCCGGCAGGACCCTCACCAGCTCGTCCAGACGGCTCTCTCCCTGGCCCTCAACCGAACTGAGTCTACCAAAACCTTCGTGGCCAAGTGTAACAAGTTCAGGGGTCTCAAGCCACGGGAGTACGCCGCCCTCAAAGACTGCGCGGAGGAAATCAGCGACAGCGTCGATCGGCTGTCACGGTCGCTGAAGGAGCTGAAGCTCTGCAAGGTTAACGGACAGGACTTCGCCTGGCACATCAGCAACGTGGAGACGTGGGTGAGCTCTGCGCTCACCGACGAGAGTACTTGCGGCGACGGCTTCGCCGGAAAGGCGCTCAGCGGCAAGATCAAGGACTCCATCAGGGGCAGAATGGTGAATGTTGCTCAGGTCACCAGCAATGCCCTCTCTCTCATCAACCAGTATGCTGCCAAACACTAA 570 0.586 MTNFSILLLLVLCALQSCFAASNPSNFIKSSCSTTQYPALCVESLSVYAAAIRQDPHQLVQTALSLALNRTESTKTFVAKCNKFRGLKPREYAALKDCAEEISDSVDRLSRSLKELKLCKVNGQDFAWHISNVETWVSSALTDESTCGDGFAGKALSGKIKDSIRGRMVNVAQVTSNALSLINQYAAKH 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01187 189 Pfam Plant invertase/pectin methylesterase inhibitor 26 181 IPR006501 GO:0004857
Vian11g01187 189 FunFam Pectin methylesterase inhibitor 1 23 185 - -
Vian11g01187 189 SMART PMEI_2 23 181 IPR006501 GO:0004857
Vian11g01187 189 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 181 - -
Vian11g01187 189 NCBIfam pectinesterase inhibitor domain 4 185 IPR006501 GO:0004857
Vian11g01187 189 CDD PMEI-like_3 30 187 - -
Vian11g01187 189 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 185 IPR035513 -
Vian11g01187 189 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 25 185 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01187 Vian-Chr11 19267814 19268383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01187 28 182 Carbohydrate Esterase AT3G14310 29.487 5.28e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01187 - - gmx:100305900 310.071