Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01185 ATGGCTTTCTTCCAAATTCTAACCATTGTTGCATTCATTCTTGTAGCCAAACCTAGCACGAGTTCATCAGCTTGTGAAAATTCTACCATCTCCACCAACTTCAGCCAAACCAAGATCAATTATAGAGAAACAAGCAATCGATCAAAAACTTCCACAGAAAGCTTCAAAAACTACATCAAAACCTCTTGCAACTCAACCACATATCCATCAATATGCTACAGCAGTTTATCCCCATATGCTGCAAAAATTGAAGCAGATCCTACGAAGCTGTGCAGTGTGTCTCTCTCCCTGGCATATAAGGCAGCAAAAAGTGCATCCACCACCATATCAAAGATTCTGAAGAAAAACAACATGACAGGGATTGCCGAACAAGTGGTGCAAGATTGCTTTGGCAATGTGAAGGACTCCATTGGTGAGCTCAAAGATTCCCTTGATTCCTTGGGCCATTTGGATGGTGCTGACAGAAAGTTTCAGATCAACAACATAAAGACATGGGTGAGTGCTTCCATCACCGATGACCAAACTTGCTCAGATGGCTTTGATGAGATGAATGTGGATTCAACTTTCACAGAAAAAATCAGAAACCTTGTTTTGGATGTGGCAAGGAAGACCAGCAATGCTTTGGGCGCTTGGTTGGAGGGTTTGTTCGAGACCAAGGGTTTGTTGGAGGGTATTAGCAGAGCGTCCATCTCCTTCCCTCACGTGGTCTTTGTTGAGGGATTAAGGTCGAGGGTCCCTGGTAGGGTTTTGTCTATTATCGTCATCTACTATTCTTGTTATCGTCTCAAGAGGTTAGGCCCTGTTTCTGGCAACTTTGGGTTTGGTCGTGGGTTGGAACGGTCTCGCGGTCATGTTTCTGTGCAGGTTAGAGAAGATGGAGTCTGGCGATTTGAGTTGTTACTTTCTCTAGTTCATTCTGATGGAGAAGATGTTGGTGGCGCGGCGAACATGGTGGCTGATTCGCGTGGTGGTTTTGATTTGGTGATTTGTCGGGATGAGGATCGCGAAGCCATCGGTGGTCAGATGGCACGAGATGAAGAGGTTCTTGTCGAATGTCGATCTGATGGTGGCGAGGCGTTGAACTCACGGTGGTCATTGGCTACTACACTTGGTGGCTCTAGAAGAAAAAACAAAGGTTGA 1140 0.4535 MAFFQILTIVAFILVAKPSTSSSACENSTISTNFSQTKINYRETSNRSKTSTESFKNYIKTSCNSTTYPSICYSSLSPYAAKIEADPTKLCSVSLSLAYKAAKSASTTISKILKKNNMTGIAEQVVQDCFGNVKDSIGELKDSLDSLGHLDGADRKFQINNIKTWVSASITDDQTCSDGFDEMNVDSTFTEKIRNLVLDVARKTSNALGAWLEGLFETKGLLEGISRASISFPHVVFVEGLRSRVPGRVLSIIVIYYSCYRLKRLGPVSGNFGFGRGLERSRGHVSVQVREDGVWRFELLLSLVHSDGEDVGGAANMVADSRGGFDLVICRDEDREAIGGQMARDEEVLVECRSDGGEALNSRWSLATTLGGSRRKNKG 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01185 379 SMART PMEI_2 54 210 IPR006501 GO:0004857
Vian11g01185 379 Pfam Plant invertase/pectin methylesterase inhibitor 58 208 IPR006501 GO:0004857
Vian11g01185 379 NCBIfam pectinesterase inhibitor domain 50 196 IPR006501 GO:0004857
Vian11g01185 379 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 209 - -
Vian11g01185 379 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 208 IPR035513 -
Vian11g01185 379 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 211 IPR035513 -
Vian11g01185 379 CDD PMEI-like_3 61 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01185 Vian-Chr11 19211402 19223283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01185 45 209 Carbohydrate Esterase AT3G14310 26.627 2.83e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01185 - - gmx:100527443 296.589