Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01184 ATGGAAACCCTTATTGCAAAAATAAGCATCACACTCCTCCTATTCATGTTTTCAATCTTCTCAGTAGCCTCATCAAGAACAGCACCAGCTTCATCCAGCAACATAGATTGGTGGTGCAACCTAACTCCACACCCCGTGCCATGCAAATACTACATCACCGCCACTCAAACGAAGAGCCACCGTTTCACATTGATCAAGCACAGAACTATCTTCCGAGGAATGCTCGTTGAACATGCCCTAAACCAGGCTCTCATCATGCAGAAAGAAGCACTTCACTCTGATCAAACCAGCATGCCAACAAAGAATCACAGAACCGTGCACGGTGATTGCGTGAAGCTCTATGGAAAAACCATCTTCCACCTCAATCGCACCCTCGAGTGCTTCCACGGGAACAAGAACTGCTCCTCGGTTGATGCACAGACATGGCTCAGCACTGCCCTCACTAACATTCAAACGTGTCAAGATGGAAAAATCGAACTTGGTGTTGAAGATTCCAACAACAACAACAATGTGACTGAGATGATAAGGAACAGCTTGGCCATCAACATGGACTTCATGAAACACGATCATCACACGGAAACGGCTCACGAAGAAGCGTTTCCAAGCCCAACATGGTTGGGCTCCACAACTGTGCCATTTACCTCTGGGCTTTGA 654 0.4694 METLIAKISITLLLFMFSIFSVASSRTAPASSSNIDWWCNLTPHPVPCKYYITATQTKSHRFTLIKHRTIFRGMLVEHALNQALIMQKEALHSDQTSMPTKNHRTVHGDCVKLYGKTIFHLNRTLECFHGNKNCSSVDAQTWLSTALTNIQTCQDGKIELGVEDSNNNNNVTEMIRNSLAINMDFMKHDHHTETAHEEAFPSPTWLGSTTVPFTSGL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01184 217 CDD PMEI-like_3 37 187 - -
Vian11g01184 217 PANTHER PECTINESTERASE 13 183 - -
Vian11g01184 217 SMART PMEI_2 30 181 IPR006501 GO:0004857
Vian11g01184 217 NCBIfam pectinesterase inhibitor domain 8 182 IPR006501 GO:0004857
Vian11g01184 217 Pfam Plant invertase/pectin methylesterase inhibitor 34 181 IPR006501 GO:0004857
Vian11g01184 217 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 185 IPR035513 -
Vian11g01184 217 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 182 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01184 Vian-Chr11 19193409 19195109 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01184 32 202 Carbohydrate Esterase AT3G47400 39.227 9.59e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01184 K01051 - gmx:100800413 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g01184 11 19193409 19195109 Vian11g01184 11 19193409 19195109 ECH