Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01183 ATGGCGAAAAGCCTTACCTTAATCATCACTGTCTTCATATCCTTGTTTTCTCTGTCTTCCACGGCCCCTTCAAGCAATATTTTCCCTAACGCCATTGATTTTTGGTGCAACAAAACCCCACATCCTCAAACATGCAAGCATTATTTTTCCTTCATAAATCACGACCCTCATCAAGACGGTATCCCAAAAACTGCATTTCAGTTCAAGAACCTCATCCTCAGAATTGCAATGCAGCAATCGGTGGAAGCCCAGATTCAGATCATGTGGTTGGGAGCCAAATGCAGAAGCAAGCAAGAAAAAACAGCATGGTCAAACTGCGTAACCCTCTACCAAGACACCATCAACCTTCTCAACCAAGCACTTAACCCTACCAAACAAAGCACAAGCTATGATCTCCAAACATGGCTCAGCACAGCCCTAACCAACATCGACACATGCCAGACAGGGTTCCACGAGCTTCGAGTTATCGACAACGTTCTACCCCTCATTCCCAACAAGAACATCTCAGAGATCATAAGTGACTTTTTGGCTCTTAACAACGCTTCTTCCTTCATTCCTCCAAAGACTCACAAAAATGGCTTCCCCAGATGTTCTTAA 597 0.4422 MAKSLTLIITVFISLFSLSSTAPSSNIFPNAIDFWCNKTPHPQTCKHYFSFINHDPHQDGIPKTAFQFKNLILRIAMQQSVEAQIQIMWLGAKCRSKQEKTAWSNCVTLYQDTINLLNQALNPTKQSTSYDLQTWLSTALTNIDTCQTGFHELRVIDNVLPLIPNKNISEIISDFLALNNASSFIPPKTHKNGFPRCS 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01183 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 181 IPR035513 -
Vian11g01183 198 Pfam Plant invertase/pectin methylesterase inhibitor 31 177 IPR006501 GO:0004857
Vian11g01183 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 180 IPR035513 -
Vian11g01183 198 SMART PMEI_2 27 178 IPR006501 GO:0004857
Vian11g01183 198 CDD PMEI-like_3 35 181 - -
Vian11g01183 198 NCBIfam pectinesterase inhibitor domain 4 179 IPR006501 GO:0004857
Vian11g01183 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01183 Vian-Chr11 19190368 19192255 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01183 32 195 Carbohydrate Esterase AT2G45220 38.182 5.48e-36 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01183 K01051 - gmx:100776412 302.753