Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01151 ATGGGTTCCAAGAGACCACATGTGATCATGACACCGTCGACAACAGCTCCTGATAACTACCAACAAGACCCTTTCTCTGTTAATATTTCTGAACTCCCAACATCAAATTCAAATTTTGGCAACGTCTTCAACCCGTTTGAGAACACTCTTGTTAGCTCATCATCACGCAGAAGTTCCATGTCCAATCGCTCTTCTGGGAGCAAGAGCAACAACTCCATCCATGAAGTGAGTTTGAGCGGCTCGGCATCCAAATCCATTCCCGTTAGGTATGGCTCAAAGGGTGCAGATTCTGAAGGACTAAGCGTGTCTCAGAGGGAACTCAGAGATGAGGATGCGAGGTTAGTGTACATAAACGACCCTTTGAAAACGAATGAGACCTTTTTGTTTGCTGGAAACTCTATCCGCACGAGCAAATACTCCCTCCTCAGTTTCATTCCCAGGAACCTTTTTGAACAGTTTCACAGAATTGCTTACGTGTACTTTCTCATAATTGCCATTCTCAATCAGCTTCCTCAGCTAGCAGTTTTTGGAAGAGCTGTTTCGATCTTGCCACTGTCCTTTGTGCTGTTTGTCACAGCTGTGAAGGATGCGTATGAGGATTGGAGAAGGCACAACAGTGATAAAGTTGAGAACAATAGGTTGGCATCGGTTTTGGTTGATGGAAACTTTTTGGAGAAGAGCTGGAGGGATGTTAGAGTTGGTGAGGTGATAAAGATCAAGGCAAACGAACCCATCCCCTGTGATATTGTGTTGCTCTCAACCAGTGATCCAACTGGGGTTGCATACGTGCAGACTATTAATCTAGATGGGGAGTCAAATTTGAAGACAAGGTATGCAAAGCAAGAGACGCATGGTAAGGAGGGGTTTGGTGGGGTGATCAAGTGTGAGAAACCCAATAGGAACATATATGGATTTCTGGCTAACATGGAAGTTGATGGCAAAAAGTTGTCACTTGGATCCTCCAACATTGTGCTTCGTGGATGTGAGCTCAAGAATACTACTTGGGCCATTGGTGTTGCTGCGTATTGTGGGAGTGAGACCAAGGCTATGCTGAACAACTCAGGAGCTCCTTCTAAGAGGAGCAGATTGGAGACACGCATGAATTTTGAGATCATTTGGCTCTCTTTCTTCCTCGTGGCATTGTGTACAATCACCTCAGTTTGTGCTGCTGTGTGGTTGAAGCGCCACAAGGATGAGTTGAATCTGTTACCATATTATAGGAAACTAGATTTTTCAGAGGGGGAAGTGGAAAGCTACGAATACTATGGATGGGGGTTTGAAGTTCTCTTCACATTCCTCATGTCAGTTATAGTGTTCCAGGTCATGATTCCCATTTCCTTGTACATTTCCATGGAGCTTGTGAGGGTTGGTCAGGCCTTCTTCATGATCCGAGACAACAGAATGTATGATGAGGAAACAAAGTCAAGGTTTCAGTGCAGAGCTTTGAACATTAATGAAGATTTGGGGCAGATTAAGTATGTTTTCTCGGATAAAACTGGCACACTAACTCAGAACAAGATGGAGTTTCAATGTGCAAGCATCTGGGGGGTTGATTACAGTTCTACAGAGAACAGCATGGAGGGTGATCAAGTTGAACATTCTGTGGAAGTGGATGGAAAGGTCTTCAGACCAAAGATGAAGGTGAAAGTTAATCCAGAACTTTTGCAGCTAGCAAGAAGTGGATTTCTCAATTTGGAGGGAAAACGGATTCATGATTTCTTTCTAGCACTGGCAACCTGCAACACTATTGTGCCTATTGTTGTTGACTCGCCTGACCCTGATGTCAAACTGATAGATTACCAAGGAGAATCACCAGATGAACAAGCATTAGCTTATGCTGCTGCAGCCTATGGTTTTATGCTAATAGAACGAACGTCCGGCCATATAGTCATCGATATTCATGGACAAAGACGAAAGTTCAATGTTTTGGGTATGCATGAGTTTGACAGTGACAGGAAGAGGATGTCAGTTATATTGGGGTACCCTGACAATTCTGTGAAAGTGTTTGTCAAAGGAGCAGACGCATCCATGCTTAATGTGATAGACAAGTCATTTAACATGGACTTACTCCTTACAAGCAAAATGAATCAGATTATAATCAACAACAACAACAGAGCAGCATGCAGAAAAAGTTTGCAAGATGCCCTTGTCATGTCTAAAAAGCTCACGTCCACATCTAGCGTTGCCAACAATTCTGGAGGAAGTTCAGAGGCAAATCCAATAGCCTTGATAATTGATGGTACCAGTCTTGTGCATATTCTTGACAGTGAGCTTGAAGAAGAGCTATTTCAACTTGCAAGTAGATGTTCTGTTGTTCTATGTTGCCGAGTTGCTCCACTGCAAAAGGCTGGCATCGTTGCCCTTGTGAAGAATAGGACATCAGACATGACTCTAGCCATTGGAGACGGTGCTAATGATGTCTCAATGATCCAAATGGCTGATGTTGGAGTTGGCATCAGTGGACAAGAGGGACGGCAAGCTGTAATGGCATCTGATTTTGCAATGGGGCAGTTTAGGTTTTTGGTTCCTCTCTTACTGATACATGGGCACTGGAATTACCAACGACTTGGTTACATGATTCTATACAATTTTTACAGAAATGCTGTCCTTGTTCTAGTCTTATTTTGGTATGTGCTCTACACTGCTTTCACTTTGACAACTGCCATAAATGAATGGAGCACGACGTTATACTCAATAGTCTACAGCTCATTACCAACTATAGTTGTTGCTATTCTAGACAAGGATCTAGGTCAGAGACATGAGGCCTACAACAAGAAACTGTTTGCCTTGACAATGTTAGATACTTTGTGGCAAAGCATGGTCATTTTCTGGGCACCCCTCTTTGCATATTGGAGCAGCACAGTTGATGTGTCAAGCATTGGAGACCTTTGGACTTTTGGGGTTGTTATTTTGGTGAATTTGCACTTGGCCATGGACGTTGTAAGGTGGTATTGGGTGACCCATGTTGCCATTTGGGGTTCTATTGTTGCAACTTTCATTAGTGTCATGATCATTGAAGCTTTTCCCAATATTCCTGGCTACTGGGCCTTCTTCAATGCTGCAGGAACTGGATTGTTCTGGTTATTGTTGCTTGGAATCATAATAGCAGCATTGCTTCCACGTTTGGTTGTAAAATATGTTTATGAATATTATTTTCCCAATGATATTCAGATTTGTAGAGAAGCTGAGAAGATTGAGTATGAGAGAGCTGTTGAAACATCAGATACCATCACTCAATCTCAGCCACTTCATGATGATGGCAGTACCTTAGTTTCCAACGATGGAACCTTTGAGTTAGGGTTCTTCAGTCCCGGTAGTTCCACAAACCGCTACATAGGAATATATCCAATCGAAGGCAACAACAACATGTTAACCATCACCAATGAAGGCAACATGGTGCTTCTTGACAACAACAATGAAACTGTCTGGTCAACAAACATCACATCACTCACAACTCAACCTCTGTTGAATCCCATGGTGCAGCTCTTAGACACTGCAAACTTGGTAGTTAAAGAAGGGAATAGCAGCAACAACAGCGACAATGAGAAAGAAGAAAGCTTTTTGTGGCAAAGCTTTGACTACCCTTGTGATACTCTCTTGCCAGGAATGAAGCTTGGATGGGACCTTAAAAGGGGTATTGATAGGAAGTTAAGGGCATGGAAAAGCTGGGATGATCCATCTTCTGGGAACTTAACTTGGGGTATGCTCCTTAGTAGTTACCCTGAATTGGTTCTGAAGAAAGGTTCAGTTGAGTATCAAAGAAGTGGACCTTGGAATGGAGCAGGGTTCAGTGGCCAACCTGTGCTGAGAATCACTCCAGTTGTTGACACAAAATTTGTGAATGATTCAAACGAGGTTTACTACTCATACTCTCTCAGGAACAAGTCTGTGATCTCAATAACTTACTTGAACCAAACCCTTCTTCATCGCCATCGCATCACATGGATTCCTGAAAACAAAACTTGGAGGGTTTATGAGTCTGTTCCTAGAGATGATTGTGATCCTTATAACACATGTGGTCCAAATGGAAATTGCAAGGTTAACGAGACACCGATTTGCCAGTGTCTGGAATGGTTTGAACCAAAGTCTCCCCAGAATTGGAACTCGCTTGACTGGACACAAGGATGTGTACGCAGTGAACCTTGGAGTTGTGGGGTGAAAGATCAAGATGGTTTTCGAAGATTTGCTTCGATGAAAGTTCCTGATACGAGAAGTTCTTCGACTTATGGAAACATGTCACTTGAAGATTGTAGGATCGAATGCTTGAAAAATTGTTCTTGCATGGCTTATTCAAACTTGGACATAAGGGAAGGTGGCAGTGGTTGTGCCATTTGGTTTGGTGATCTCATTGATTTGAAATTGGTTCAAGCAAGCCGACAAGACATATACATTCGAATGGCTGTTTCAGGAAATGAACAAGGCACAAAGAATATTGTATCAACCGAAGATGATGAAGAAAACCAAGATGTTGAGCTTCCTTTGTTTGATCTCGCTTTAATATCCGCTTGGAAATTGTGGAAAGAGAATGATCCAACAAAATTGGTTGATATGTATTTAGAAGACTCATACGTTGTATCGGAAGCCTTACGTTGCATTCAAGTTGGTCTTTTATGTCTACAACACCATCCGAATGACAGACCAAACATGGCATCAGTGGTTGTTATGTTGACCAATGAAACTATTTTAGCTCAGCCAAAGGAGCCTGGTTTCTTGATGGAAAGAGTGGTCGCTAATGAAGTAGAATCTTCTACTGAAAAACAAATATCTTTTTCAGTTAACGAGGTGTCTATTTCACTAGTGCATGCTAGATAA 4812 0.4237 MGSKRPHVIMTPSTTAPDNYQQDPFSVNISELPTSNSNFGNVFNPFENTLVSSSSRRSSMSNRSSGSKSNNSIHEVSLSGSASKSIPVRYGSKGADSEGLSVSQRELRDEDARLVYINDPLKTNETFLFAGNSIRTSKYSLLSFIPRNLFEQFHRIAYVYFLIIAILNQLPQLAVFGRAVSILPLSFVLFVTAVKDAYEDWRRHNSDKVENNRLASVLVDGNFLEKSWRDVRVGEVIKIKANEPIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETHGKEGFGGVIKCEKPNRNIYGFLANMEVDGKKLSLGSSNIVLRGCELKNTTWAIGVAAYCGSETKAMLNNSGAPSKRSRLETRMNFEIIWLSFFLVALCTITSVCAAVWLKRHKDELNLLPYYRKLDFSEGEVESYEYYGWGFEVLFTFLMSVIVFQVMIPISLYISMELVRVGQAFFMIRDNRMYDEETKSRFQCRALNINEDLGQIKYVFSDKTGTLTQNKMEFQCASIWGVDYSSTENSMEGDQVEHSVEVDGKVFRPKMKVKVNPELLQLARSGFLNLEGKRIHDFFLALATCNTIVPIVVDSPDPDVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHIVIDIHGQRRKFNVLGMHEFDSDRKRMSVILGYPDNSVKVFVKGADASMLNVIDKSFNMDLLLTSKMNQIIINNNNRAACRKSLQDALVMSKKLTSTSSVANNSGGSSEANPIALIIDGTSLVHILDSELEEELFQLASRCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLYTAFTLTTAINEWSTTLYSIVYSSLPTIVVAILDKDLGQRHEAYNKKLFALTMLDTLWQSMVIFWAPLFAYWSSTVDVSSIGDLWTFGVVILVNLHLAMDVVRWYWVTHVAIWGSIVATFISVMIIEAFPNIPGYWAFFNAAGTGLFWLLLLGIIIAALLPRLVVKYVYEYYFPNDIQICREAEKIEYERAVETSDTITQSQPLHDDGSTLVSNDGTFELGFFSPGSSTNRYIGIYPIEGNNNMLTITNEGNMVLLDNNNETVWSTNITSLTTQPLLNPMVQLLDTANLVVKEGNSSNNSDNEKEESFLWQSFDYPCDTLLPGMKLGWDLKRGIDRKLRAWKSWDDPSSGNLTWGMLLSSYPELVLKKGSVEYQRSGPWNGAGFSGQPVLRITPVVDTKFVNDSNEVYYSYSLRNKSVISITYLNQTLLHRHRITWIPENKTWRVYESVPRDDCDPYNTCGPNGNCKVNETPICQCLEWFEPKSPQNWNSLDWTQGCVRSEPWSCGVKDQDGFRRFASMKVPDTRSSSTYGNMSLEDCRIECLKNCSCMAYSNLDIREGGSGCAIWFGDLIDLKLVQASRQDIYIRMAVSGNEQGTKNIVSTEDDEENQDVELPLFDLALISAWKLWKENDPTKLVDMYLEDSYVVSEALRCIQVGLLCLQHHPNDRPNMASVVVMLTNETILAQPKEPGFLMERVVANEVESSTEKQISFSVNEVSISLVHAR 1603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01151 1603 CDD B_lectin 1086 1195 IPR001480 -
Vian11g01151 1603 Gene3D - 185 352 - -
Vian11g01151 1603 Pfam Cation transport ATPase (P-type) 590 678 - -
Vian11g01151 1603 Gene3D - 505 526 IPR023299 GO:0000166
Vian11g01151 1603 Gene3D Transferase(Phosphotransferase) domain 1 1477 1567 - -
Vian11g01151 1603 Pfam D-mannose binding lectin 1116 1221 IPR001480 -
Vian11g01151 1603 Gene3D - 677 840 IPR023214 -
Vian11g01151 1603 Pfam Phospholipid-translocating ATPase N-terminal 115 181 IPR032631 -
Vian11g01151 1603 NCBIfam HAD-IC family P-type ATPase 771 886 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian11g01151 1603 NCBIfam HAD-IC family P-type ATPase 427 522 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian11g01151 1603 Pfam Domain of unknown function (DUF3403) 1557 1603 IPR021820 GO:0004674
Vian11g01151 1603 SMART ntp_6 1387 1466 IPR003609 -
Vian11g01151 1603 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 104 681 - -
Vian11g01151 1603 Gene3D - 492 504 IPR023214 -
Vian11g01151 1603 NCBIfam phospholipid-translocating P-type ATPase 129 684 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vian11g01151 1603 SUPERFAMILY alpha-D-mannose-specific plant lectins 1116 1226 IPR036426 -
Vian11g01151 1603 SMART blect_4 1080 1195 IPR001480 -
Vian11g01151 1603 SUPERFAMILY HAD-like 490 846 IPR036412 -
Vian11g01151 1603 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 502 684 IPR023299 GO:0000166
Vian11g01151 1603 SUPERFAMILY Calcium ATPase, transduction domain A 212 349 IPR008250 -
Vian11g01151 1603 ProSiteProfiles EGF-like domain profile. 1329 1365 IPR000742 -
Vian11g01151 1603 MobiDBLite consensus disorder prediction 54 80 - -
Vian11g01151 1603 ProSiteProfiles PAN/Apple domain profile. 1384 1467 IPR003609 -
Vian11g01151 1603 Gene3D - 1069 1192 IPR036426 -
Vian11g01151 1603 Gene3D - 474 491 - -
Vian11g01151 1603 CDD PAN_AP_plant 1383 1467 - -
Vian11g01151 1603 Pfam S-locus glycoprotein domain 1254 1363 IPR000858 GO:0048544
Vian11g01151 1603 MobiDBLite consensus disorder prediction 8 25 - -
Vian11g01151 1603 ProSitePatterns E1-E2 ATPases phosphorylation site. 497 503 IPR018303 -
Vian11g01151 1603 SUPERFAMILY Calcium ATPase, transmembrane domain M 129 1053 IPR023298 -
Vian11g01151 1603 Pfam Phospholipid-translocating P-type ATPase C-terminal 828 1054 IPR032630 -
Vian11g01151 1603 Pfam PAN-like domain 1384 1452 IPR003609 -
Vian11g01151 1603 ProSiteProfiles Bulb-type lectin domain profile. 1062 1183 IPR001480 -
Vian11g01151 1603 FunFam Phospholipid-transporting ATPase 187 352 - -
Vian11g01151 1603 MobiDBLite consensus disorder prediction 1 25 - -
Vian11g01151 1603 PRINTS P-type cation-transporting ATPase superfamily signature 495 509 - -
Vian11g01151 1603 PRINTS P-type cation-transporting ATPase superfamily signature 800 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01151 Vian-Chr11 18605154 18634467 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01151 60 685 Primary Pumps ATPases AT5G04930 68.146 0.0 905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01151 K14802 - gmx:100813982 1134.4