Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01144 ATGGAATGCCAAGATGGTGGTGATAAGAATGAAAAACATTTAGTGCAACAACCTTTGGTGCGACAAAATTCCTTGTACGGTCTGACACTGAACGAAGTTGAGAATGAATTAGGTGAGAGAGGAAAACCAGTGAGTAGCATGAACCTTGATGAGCTTCTAAAAATTGTGTACACTGTTGAAGAAAACCATTCAACCAAAGCTGGTTTATCCTTAACCAGTTCTCTCTGTATGAAAACTGTTGATGAGGTTTGGAGAGACATACAAGAAAGCAAAGACAACAAGTTTGAAGAGAGACAGCTTAGACTGGGAGACATAAAATTAGCGGATTTTTTGGTGAAAGCAGGAGTTGTTGTTGAAGCATCTTCTACCGTTGTTAATCCTCAACAACCACAATACCAAATTCCACAACAAGGTTTAATGGGGATTTACATGACTGGCCAGAACATAGCACAATCGTTACACACACGAGCTACTGCTACATCATAA 486 0.3951 MECQDGGDKNEKHLVQQPLVRQNSLYGLTLNEVENELGERGKPVSSMNLDELLKIVYTVEENHSTKAGLSLTSSLCMKTVDEVWRDIQESKDNKFEERQLRLGDIKLADFLVKAGVVVEASSTVVNPQQPQYQIPQQGLMGIYMTGQNIAQSLHTRATATS 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01144 161 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 20 130 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01144 Vian-Chr11 18464426 18464911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01144 15 147 bZIP Transcription Factor Family AT2G41070 46.043 2.16e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01144 K14432 - var:108332685 311.612