Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01134 ATGGAAGGAGGGACAAGGCAGACTTCAGTTCCTCTTCATGGTTCCATTGATAAGTCTAGGATTCTGGATGTTAAACCTCTGAAGAGTTTGATTCCTATTTTCTCTATGTCTTCTCAAGCTTCACCTCCTGGCCAGTATCCTTCTGGGTTTTCACCATTTTCCCCCTTTGGTGCACCTCAGCAAACTCCAACTGAGGTGACACCAAATGGTGCTTCCATACCTACTCCAATAAGGGTATATAGCAGTTCACCAGGGGCAGGAGACTCCAGTTCAACAATGGAGGGGTTCAGTGATCAACGTACTTCTGGGAAGAAAAAACGTGGATCACCAAAGTCGAGCAGCGCCAAATCATCCTTAGATAAGCCTAAGAAAACTCAAGAGCCCCCTGTTGATTTAAGTGTTTTAGTTGGTATTACCCCTGCTCAAAAAGAAGATGGTAGCCGTGAAGTGGTTAATTTTGTGCTCATGGCGTTTGATGCTCTTAGAAGAAAGCTCTGCCAACTTGAAGGGGCCAGGGAATTGAGCTTGGGTCCGATCAAGCGTGCAGATTTGAAAGCCTGCAATACTTTGATGACCAAAGGAATCCGGACAAACATGAGGAAGAGAATAGGATCAGCTCCTGGGGTTGAGATTGGTGACATTTTCTTTTTCAGAACCGAAATGTGTGTTGTGGGTTTGCATGCTCAGTCCATGGGTGGAATTGATGCCTTGCATGTTAGGGGTGAGTTTGAGGAGGAAACTTTGGCTGTGAGCATTGTTTCATCAGGAGAATATGATGACGATGCTGAGGATATTGATGTTATAACGTATACTGGTCAGGGAGGGAACTTCTTCAAGAAAGATAAGCACGCCATTGACCAGAAGCTTAAAAGGGGCAATCTTGCTTTGGATAGGAGTTCGCGACAACTCAATGAAATAAGAGTCATCCGGGGGATTAGGGATGATGTGAATCCAAATTTAAAAGTCTATGTCTATGATGGTTTGTATAAAATTCAGGATTCATGGATTGGAAAAGCAAAAGGTGGTGGTGATGTATTTAAGTATAAGTTGGTTAGAATGCCTGGACAACCTAGTGCCTATGCTGTTTGGAAATCAGTTCAGAAGTGGAAATCTGGCACTTCAAGGATGGGACTTATTCTTGCAGACATTTCCAATGGAGCTGAGAATATTCCTGTATCACTTGTCAATGAAGTTGATAATGTGAAGGCGCCTACTTATTTCAATTATTTCCATTCTCTTAGACACCCTAAATCATTCAGTTTGATGCAGCCTTCAAATGGATGCACCTGTACTAAATCATGTGTTCCTGGTGATTTGAACTGCTCTTGCATTAGGAGAAATGAAGGTGATTTCCCTTATATTGGAAAAGGTGTTCTGGTGAGCCGGATGAAATTGGTTCATGAATGTGGCCCTACATGTCAGTGTTTTCCTAACTGCAAAAATAGAGTATCCCAAACCGGTTTAATGCACCCCATGGAAGTGTTCAAAACGAAGGATAGAGGGTGGGGTCTTCGGTCTCTGGATCCTATTCGCTCTGGTACCTTCGTTTGTGAATATGCTGGAGAAGTTGTTGATAGGGCCAAAGTAAGTCAGCTTGTGAGGGAAGGAAATGAGTATGTTTTTGATTCAACCCGGATTTATGGTCAATTCAAGTGGAATTATGAGCCTAAGCTTTTGGAAGAAGTCAATCCCAGTGAATCTAGTGAGCATTATGCCATGCCGTATCCTTTGACCATAAGTGCCAAGAATTTTGGGAATGTGGCTAGATTCATGAATCATAGTTGCTCCCCAAATGTTTTTTGGCAGCCTGTGGTATATGAAGAAAACAACCAATCGTACGTCCATGTTGCCTTCTTTGCGCTCAGACACATTCCACCAATGACAGAGTTAACGTATGACTATGGAGTTGCCCGATCTGATCATGCTGAGGGTATCCGTGCAGTCAAAGGGAGAAAGAAATGTTTATGCCGATCATCGAAATGCCGAGGTTCTTATGGTTAA 2001 0.4303 MEGGTRQTSVPLHGSIDKSRILDVKPLKSLIPIFSMSSQASPPGQYPSGFSPFSPFGAPQQTPTEVTPNGASIPTPIRVYSSSPGAGDSSSTMEGFSDQRTSGKKKRGSPKSSSAKSSLDKPKKTQEPPVDLSVLVGITPAQKEDGSREVVNFVLMAFDALRRKLCQLEGARELSLGPIKRADLKACNTLMTKGIRTNMRKRIGSAPGVEIGDIFFFRTEMCVVGLHAQSMGGIDALHVRGEFEEETLAVSIVSSGEYDDDAEDIDVITYTGQGGNFFKKDKHAIDQKLKRGNLALDRSSRQLNEIRVIRGIRDDVNPNLKVYVYDGLYKIQDSWIGKAKGGGDVFKYKLVRMPGQPSAYAVWKSVQKWKSGTSRMGLILADISNGAENIPVSLVNEVDNVKAPTYFNYFHSLRHPKSFSLMQPSNGCTCTKSCVPGDLNCSCIRRNEGDFPYIGKGVLVSRMKLVHECGPTCQCFPNCKNRVSQTGLMHPMEVFKTKDRGWGLRSLDPIRSGTFVCEYAGEVVDRAKVSQLVREGNEYVFDSTRIYGQFKWNYEPKLLEEVNPSESSEHYAMPYPLTISAKNFGNVARFMNHSCSPNVFWQPVVYEENNQSYVHVAFFALRHIPPMTELTYDYGVARSDHAEGIRAVKGRKKCLCRSSKCRGSYG 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01134 666 SMART set_7 490 641 IPR001214 GO:0005515
Vian11g01134 666 ProSiteProfiles SET domain profile. 490 635 IPR001214 GO:0005515
Vian11g01134 666 MobiDBLite consensus disorder prediction 54 98 - -
Vian11g01134 666 MobiDBLite consensus disorder prediction 36 128 - -
Vian11g01134 666 SUPERFAMILY SET domain 389 663 IPR046341 -
Vian11g01134 666 SMART preset_2 380 474 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vian11g01134 666 ProSiteProfiles Post-SET domain profile. 650 666 IPR003616 -
Vian11g01134 666 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 64 666 IPR025794 GO:0016571
Vian11g01134 666 Pfam SET domain 501 635 IPR001214 GO:0005515
Vian11g01134 666 SUPERFAMILY PUA domain-like 186 374 IPR015947 -
Vian11g01134 666 ProSiteProfiles Pre-SET domain profile. 426 487 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vian11g01134 666 SMART G9a_1 199 356 IPR003105 -
Vian11g01134 666 ProSiteProfiles YDG domain profile. 204 352 IPR003105 -
Vian11g01134 666 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 187 371 - -
Vian11g01134 666 Pfam SAD/SRA domain 203 356 IPR003105 -
Vian11g01134 666 Gene3D SET domain 374 665 IPR046341 -
Vian11g01134 666 Gene3D - 186 373 IPR036987 -
Vian11g01134 666 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 98 661 - -
Vian11g01134 666 Pfam Pre-SET motif 383 482 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01134 Vian-Chr11 18283488 18285488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01134 1 666 Su(var)3-9 homologs AT1G73100 49.782 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vian11g01134 SAD_SRA 2e-45 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01134 K24405 - gmx:100812173 1111.67