Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01127 ATGTCTAATCCACAAGCACAAGTTAAACAAGAAAAACAGCACATGAGCTGCCATGAAGCACACCAAAGGGCTGCAAAATCTGTTTGCTCTGTTTGCAATAACAGAAGACCACAGTTTGAAAGGAACAGGAAAAAAGAGTTCTCATATGCTGAGTTGTGTTCAGCCACACAAGGGTTTTCCCCTAAGAACTATATATCAGAAGGAGGGTTTGGTTCTGTCTTTAAAGGGGAGTTGTGTGGACAGAAGATTGCTGTCAAGCAACACACGTACTCTAACCAAAAGGGAGAGAAGGAATTCAAGTCTGAAGTTGATGTTCTCAGCAAAGCAATGCATGAGAATGTGGTCATGCTGTTAGGATCATGCGCAGAAGGGATTCATAGACTTCTTGTGTATGAATATATCTGCAATGCTTCATTGGACCAACATTTATCTCAACATTGTCGTACACTTCTTGATTGGCCAGACAGGGTGAAAGTAGCTGATGGCGATTTTGGTTTGGCTAGAACTGTGACTGAAGGCTCCTCATACTGTACAGAATGTGTAGGGAATCTGACTTATATGGCACCAGAATATGCAGAATCTGGAAAAGTGTCAATTAAAACAGATGTGTATTCCTTTGGGGTGGTTCTACTACAGTTAATAACTGGAATGAGGACCACAGACAAACGACTTGGTGGTAAAGGTCTGGCTAGACCACTACTGAGGGAAGGAAAATGCCAAGACCTTATTGATGGGAGAATGATGAACTCCCATGATTGCCATCAACTCTATTGGATGAGCCGTCTAGCCGGAAATTGTCTTCAGAGGGATCCCGAAAAGAGATTGCATATGAGTACAGTGGTGAAGGCTTTAAATCAGATAGGAAAAGGTTGTAGCTGCATTGTGAGAAAAGATCATACCCTTCTAATCTCAGGCCCTTCTAGGTCAAAAGATGATTCAGAGGAATCCTCACAATCAGACGAGTGA 966 0.4234 MSNPQAQVKQEKQHMSCHEAHQRAAKSVCSVCNNRRPQFERNRKKEFSYAELCSATQGFSPKNYISEGGFGSVFKGELCGQKIAVKQHTYSNQKGEKEFKSEVDVLSKAMHENVVMLLGSCAEGIHRLLVYEYICNASLDQHLSQHCRTLLDWPDRVKVADGDFGLARTVTEGSSYCTECVGNLTYMAPEYAESGKVSIKTDVYSFGVVLLQLITGMRTTDKRLGGKGLARPLLREGKCQDLIDGRMMNSHDCHQLYWMSRLAGNCLQRDPEKRLHMSTVVKALNQIGKGCSCIVRKDHTLLISGPSRSKDDSEESSQSDE 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01127 321 PIRSF ILK 2 150 - -
Vian11g01127 321 PIRSF ILK 147 300 - -
Vian11g01127 321 FunFam Proline-rich receptor-like protein kinase PERK8 19 133 - -
Vian11g01127 321 Gene3D Phosphorylase Kinase; domain 1 29 133 - -
Vian11g01127 321 Gene3D Transferase(Phosphotransferase) domain 1 148 297 - -
Vian11g01127 321 Pfam Protein tyrosine and serine/threonine kinase 150 284 IPR001245 GO:0004672|GO:0006468
Vian11g01127 321 Pfam Protein kinase domain 63 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g01127 321 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 36 161 - -
Vian11g01127 321 SUPERFAMILY Protein kinase-like (PK-like) 36 283 IPR011009 -
Vian11g01127 321 ProSiteProfiles Protein kinase domain profile. 59 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01127 Vian-Chr11 18197774 18200760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01127 42 287 Trihelix Transcription Factor Family AT5G38560 37.838 8.38e-55 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Vian11g01127 PK_Tyr_Ser-Thr 3.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01127 - - vun:114183900 498.049