Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01121 ATGAAGTTGAATAGTTTCGGATATGAAGTTGAGTACATGAGACTTGACGTGTGGTGGTATGCGGGTGAAAATATGACAGGGTGTTGTGGGGTTGTCGCACCGTGGTGGTTTTCATCAACTTCCCCTAGCCGTGGTCTCTGTTGGCTCTCCTCGCCGTTGTCTCCGTTGGCTTTTCTCGCCATGGTCTCCGTTGGCTCTCCTTGCAGTCATCTCAAAGAGTACACGAACAATCAGTATGACAAATACGACAACAAGAAGCACTGTGATTCTAATGTCTTTGGTGACGATGCGTTTGCCAGACTCTATGCCTTCGTTGACGCTGACATCGAGGCATTGCTTCAGCTTTTTTCTCGAAGATTATACAGTGATTCATGCAAATGGGAAGATGATCAATGTCTCAAGGATCTCAGACTTCTTGGAATTGACATGGCCAAAGTCTTCATAATTGACAACACTCCACGGGTTCTGAAATGTGAGTACGCCGTTAGAGGAGAGGTTGTCACACTTGCTCAGAATTTTCTATGGACAATTGTTGCAATACTTTCTGCTTACAACGCCTTAATATTGCAGAATTTGCAAAAGGATTTACTGGCCAATCCCGGTTCTCATCCATTTCACGAGGTCAATCTTGAATATCTTGGACGTGTTGTTTTCAACAATGAAGGCCTGCTTTATCCTGACAGTGTTGTTGGAACTGATTCACATACAATAATGATTGATTGA 723 0.4371 MKLNSFGYEVEYMRLDVWWYAGENMTGCCGVVAPWWFSSTSPSRGLCWLSSPLSPLAFLAMVSVGSPCSHLKEYTNNQYDKYDNKKHCDSNVFGDDAFARLYAFVDADIEALLQLFSRRLYSDSCKWEDDQCLKDLRLLGIDMAKVFIIDNTPRVLKCEYAVRGEVVTLAQNFLWTIVAILSAYNALILQNLQKDLLANPGSHPFHEVNLEYLGRVVFNNEGLLYPDSVVGTDSHTIMID 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01121 240 Gene3D - 70 186 IPR023214 -
Vian11g01121 240 Gene3D Aconitase, domain 3 187 240 IPR015931 -
Vian11g01121 240 PANTHER ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER 196 240 IPR006249 -
Vian11g01121 240 Pfam NLI interacting factor-like phosphatase 114 156 IPR004274 -
Vian11g01121 240 SUPERFAMILY Aconitase iron-sulfur domain 189 239 IPR036008 -
Vian11g01121 240 SUPERFAMILY HAD-like 100 157 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01121 Vian-Chr11 18008721 18015690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01121 78 114 SNARE and Associated Proteins AT3G45280 54.054 1.05e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01121 K01681 - apan:127248031 78.5666