Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01115 ATGCCGGTCAGGCCAGAAGCAACTACTGTCGTCGATGAAGGAGAGCTGGATGACGACAGCTTCAACCGTTTGACGAAGGTGTTGTGCAACGATTGGTCCATCGGAACCCTTCCCTCACAGCTGTGTGACGTTGCAGGTTCCTTCTATCGTCAAACTCGTACGGACGGGAAAGAGATATTTTTAAAGAATGCTTTATCTGATGGAAACTATAATTTTCAGGCTCGGATAAAGAAGATAATGCAAGCAGATGAGGATGTCGGAAAGATAGCATTGGCAGTTCCTGTTTTAGTATCTAAAGCTCTGGAGTTATTTTTGCAAGATCTCTGTGACCGCACTTATGAAATAACTCTTCAGAGAGGAGCTAAGACCATGAATGCATTGCATTTGAAATATTGTGTACAAAGTTATAACGTCTTCGACTTTCTGAGAGACATTGTCAGCAGGGTTCCTGACTATGGGCATGGACATGGCCATTCCGAGGCTGGAGCTGATGATCGTGCCCTTTCAAAGAGAAGGAAAGCTGCTGGTGTTGAGGGCAATGAAAGTGATGAAGAGGCCAAGAGGAGTAAGATGCGCGAGTTGGGCCACACCAGCACAACTAGTAGGGGAAGAGGCCGAGGTAAAGGAAGAGGCCGTGGACGAGGGGTTCGAACTGTTGAAAGAGACATCATTCATCAGCAGGTTGAATCTGAGCCTTGCTCCTCTATTCAACAAATTAGCAATGATATGCCTAACACAAGTCTGCCAATAGATAATGGTGTGCAATCCAAGGAGTATACAAAGGAGACTTCTGCAGCTCATGAGGAAAGTGCTCAATCTTTCCGTAACATTGATCTGAATGCTAACTTAAACGAAAATGGAGACAAAAATGCCAGTGCAGCTGTTGAAGCTCCATTGCCTGAGCCTGCTGACATGGACATTAAACATGAAGAAATTCCAGGCTGGTCCCTATCGGATGCCGACAAGATGGCCATTGACACTATGCAACTGGCAACCCTCGCTAGTAGACTAGAAGAGGATGATGAAGATTATGATGAGGAAGGGTAA 1047 0.4556 MPVRPEATTVVDEGELDDDSFNRLTKVLCNDWSIGTLPSQLCDVAGSFYRQTRTDGKEIFLKNALSDGNYNFQARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNALHLKYCVQSYNVFDFLRDIVSRVPDYGHGHGHSEAGADDRALSKRRKAAGVEGNESDEEAKRSKMRELGHTSTTSRGRGRGKGRGRGRGVRTVERDIIHQQVESEPCSSIQQISNDMPNTSLPIDNGVQSKEYTKETSAAHEESAQSFRNIDLNANLNENGDKNASAAVEAPLPEPADMDIKHEEIPGWSLSDADKMAIDTMQLATLASRLEEDDEDYDEEG 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01115 348 MobiDBLite consensus disorder prediction 153 219 - -
Vian11g01115 348 FunFam dr1-associated corepressor homolog 63 148 - -
Vian11g01115 348 MobiDBLite consensus disorder prediction 228 247 - -
Vian11g01115 348 MobiDBLite consensus disorder prediction 153 199 - -
Vian11g01115 348 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 74 133 IPR003958 -
Vian11g01115 348 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 74 180 - -
Vian11g01115 348 SUPERFAMILY Histone-fold 80 149 IPR009072 GO:0046982
Vian11g01115 348 Gene3D Histone, subunit A 71 148 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01115 Vian-Chr11 17844367 17852758 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01115 74 337 CCAAT-HAP5 Transcription Factor Family AT3G12480 46.763 4.02e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Vian11g01115 CBFD_NFYB_HMF 9.9e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01115 K21752 - gmx:100810093 414.075