Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian11g01111 | ATGTCCGAGGGTATGACCGTGTCTGACCCAACAGCCCCTATCGGACCTTCCGTCGTGTCCGACGCCATCATCCATCACACCCCTTCTTCGTCTCATTCATACGATGTATTTGTGAGCTTCCGTGGTGAAGACACGCGCAACAACTTCACTAGTTTTCTCTTTGGAGATCTCCATCGAGCAGGCATTGTTGCCTTCAGAGATGACGAATGTATCAAAAAAGGTGATTTCATAGCACCCGAGCTTCTACAAGCCATTCAGGGCTCTCGACTTTTCGTTGTTGTCTTATCAAAGAACTATGCTTCCTCCACTTGGTGCTTACGTGAACTCGTAGAGATATTTAATTGCTGTGAAACTTCACCAAGACCTGTTATACCTATATTTTATGATGTTGAGCCTACGACGGTGCGCAACCAGAAAGGATGTTATGAGAAAGCATTTGCAGAACACGAAAACAGATTCAGAGAAGACAAGGTAAAGATGGAGGAAGTTCAAAGATGGAAAGAAGCTCTCAGAAAACTGGCCAATATCTCTGGTTCGGATATCGGAAATAAGCCACAAAATGAACAGATTGAAAAAATTGTTCAAGAGATAATAAATAATTTGAGACCAAAATTTTTAAATCTTCCAAGGGATCAACTAGTTGGGATAGAGGATCGAGTTCAAGACTTAGGAAATATTTTGCGTTTCGACCTCAATGATGTTCGAGTTGTCGGAATAAGTGGGATGGGTGGCATAGGAAAGACAACTCTTGCTCGGGCTTTATACGAAAGAATTTGTCATCAATATAAATATCGTTGTTTTATTGACGATGTAAGCAAAATATTTCTAGATTCTCGTTCGATGGGCTTACAAAAGCAATTAATTTCTCAGACTCTAAATGAGAAAAGTGTAAAGATTTGCAATGTTACTGAGGGAACATGTTTGGTGCAGTCCAAACTGAACAATGCTAAGGCACTCATAGTTTTTGACAACGTTGATCAAGTTCAACAACTGAGGATATTTAGCGGAAATAGAGACAATTTGTTGCGAGAATGCTTAGGTGGAGGGAGCAGAATCATCATAGTTTCTAGGGATGAACAAATATTGAAGATACACGGAGTGGATGATATTTATCAAGTTGGACCGTTGGAACGGAATGATGCTATCCAACTATTTTGTAGAAATGCTTTCAAAGTTAATTACATTTTGAGCGATTATGAAAAGTTGGCAGATAAGATACTATCACATGTTGAAGGCCATCCCTTGGCAATTGAAACAATTGGATCATCTTTGTTTGGCCGAAGTTTGTCACAATGGAAAAGTGTATTGGAAGGGCTGAAAGAAAATAAAAGTAAAAATATTATGGATATTTTGCGCATAAGTTATATTCAACTGGAAGAAAAATACAAACAAACTTTTTTAGATATTGCTTGCTTCTTCAATTCTTATGATGAAGAATGTGTGAAGGAAATTCTAAATTTCCGTGGATTTCATCCTGAAGATAGCATACAAGTTCTCATTGATAAATCACTCATTACCAGAGATTTCTATGATGGGATGACAATAAAAATGCATAGCTTGCTAGTGGATTTGGGCAGGTGTATTGTTCGGGAAGTATCACCTAAAGAGCCTATAAAGTGGAGTAGGTTGTGGACACGCAAAGATCTCCATGATGCTATGTCAGAGAACGAGGCAACTCGAAACCTTGAGGCAATAGTTCTTAGATGGGTATATAAGAGGGATGCAGATGAAACAATCAAGGCGGATGGTCTATCAAAAATTAAACACCTGAAATTGCTTTATGTTGCGAACGTGAACTTTTCGGGAAGTCTGAGTCATCTTTCGAATGAACTAGGATATCTTGTTTGGTTTGGATATCCGTATGAGTGTTTGCCTCAAAGTTTTCAGCCACACAAACTAGTTGAGTTAATCATAAGTAAGAGCAGTATTAAACGACTGTGGGAAGGCACAAAGTCGTTACCCAATTTGAAGCATTTGGGTCTCTCTTTTTGCAAAAGTTTAGTTGAGATGCCAGATGTAGGAGAGGCCCTAAATCTTGAATGGATAAATCTTGAAGGATGCGTGCAACTCCAAAAACTCAATCCATCGATTGGGAGTCTGAGAAAGCTTGTTCGTTTGAATTTGAAAGACTGCAAAAAACTAGTAATCTTATCCAATAATATATTAGGCCTGAATTCTCTTAAATATTTGGTTGTCAGTGGTTGTTCAATAATAGATAGTAAATGCTTACAAGATGAAACAAGGAACACAGAGCAGTTGATCAGCTGTTTGTCGCCCTCCTCTCCTCTCTCTTGTTTGTGTGAGCTCGATCTAAGCTTCTGTAACTTAGTTGAAATTCCTGATTACATTGGAAAGTTAAGTTGCTTAGAGAGGCTAAATTTAGAGGGAAACAATTTTGTTAAATTGCCTAACCTCAAGGACCTTTGGAGACTGTCTTTTTTAAAGCTACAGGATTGCAAGCGATTGAAATACTTGCCTGATCTCCCTTCACGAACTGTCTTGCCCTCAGAACCTTTCATACCGAGATTCCCATCTTCAATACTTGATTCGCCTGATTTTTTGACTGAGGAAGAAATAGGTATTAGATTTGCAGGATTAATCATTTTCGGCTGCCCAGAATTAGTTGAGATTGAACAGTGCACTACAAAGAGTTTTTCATGGGCAATTCAAATTGTTGAGGCGACCTACCACCATGTGGCCTACCAATTGCCACAAAGTATTATACCTGGAAGTCAAATACCAAGCTTGTTCGACGATGAGTTTGAGAACGTCGACATAGGATACCCGGACGAAGAATGCCTGTACCTATTGGTTGATCCACCTCCCGTTCCGCATGACAATAATTTTATTGGTGTTTTGTGTTGCGTAATATTTCGTCTAGACCATGAAGAAATTCCAATGGATTCTAGAAGAGATCACATGTGGTTACATTATGAAGGGGTTTCTATGGACGAACGGGATATTCCTGCTTGTGGTTTCCCTTGTGACTGGATTGAGTCATTGTTGGGTTACAATAATATTGCTACGGCGTATGTGAAGAAATTTAAGTATCGCTGGGTAAATGAACAAGACCTAATTAACCTCAAAATGACGCATTTTTCAAATTTCACAGGTCGGAAGCGCAAGATTTCCGTAATTGAGGAAAACGGTTAG | 3153 | 0.3907 | MSEGMTVSDPTAPIGPSVVSDAIIHHTPSSSHSYDVFVSFRGEDTRNNFTSFLFGDLHRAGIVAFRDDECIKKGDFIAPELLQAIQGSRLFVVVLSKNYASSTWCLRELVEIFNCCETSPRPVIPIFYDVEPTTVRNQKGCYEKAFAEHENRFREDKVKMEEVQRWKEALRKLANISGSDIGNKPQNEQIEKIVQEIINNLRPKFLNLPRDQLVGIEDRVQDLGNILRFDLNDVRVVGISGMGGIGKTTLARALYERICHQYKYRCFIDDVSKIFLDSRSMGLQKQLISQTLNEKSVKICNVTEGTCLVQSKLNNAKALIVFDNVDQVQQLRIFSGNRDNLLRECLGGGSRIIIVSRDEQILKIHGVDDIYQVGPLERNDAIQLFCRNAFKVNYILSDYEKLADKILSHVEGHPLAIETIGSSLFGRSLSQWKSVLEGLKENKSKNIMDILRISYIQLEEKYKQTFLDIACFFNSYDEECVKEILNFRGFHPEDSIQVLIDKSLITRDFYDGMTIKMHSLLVDLGRCIVREVSPKEPIKWSRLWTRKDLHDAMSENEATRNLEAIVLRWVYKRDADETIKADGLSKIKHLKLLYVANVNFSGSLSHLSNELGYLVWFGYPYECLPQSFQPHKLVELIISKSSIKRLWEGTKSLPNLKHLGLSFCKSLVEMPDVGEALNLEWINLEGCVQLQKLNPSIGSLRKLVRLNLKDCKKLVILSNNILGLNSLKYLVVSGCSIIDSKCLQDETRNTEQLISCLSPSSPLSCLCELDLSFCNLVEIPDYIGKLSCLERLNLEGNNFVKLPNLKDLWRLSFLKLQDCKRLKYLPDLPSRTVLPSEPFIPRFPSSILDSPDFLTEEEIGIRFAGLIIFGCPELVEIEQCTTKSFSWAIQIVEATYHHVAYQLPQSIIPGSQIPSLFDDEFENVDIGYPDEECLYLLVDPPPVPHDNNFIGVLCCVIFRLDHEEIPMDSRRDHMWLHYEGVSMDERDIPACGFPCDWIESLLGYNNIATAYVKKFKYRWVNEQDLINLKMTHFSNFTGRKRKISVIEENG | 1050 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian11g01111 | 1050 | SUPERFAMILY | L domain-like | 517 | 828 | - | - | |
Vian11g01111 | 1050 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 30 | 203 | - | - | |
Vian11g01111 | 1050 | Gene3D | Ribonuclease Inhibitor | 576 | 751 | IPR032675 | - | |
Vian11g01111 | 1050 | Gene3D | - | 376 | 459 | IPR042197 | - | |
Vian11g01111 | 1050 | Pfam | TIR domain | 34 | 207 | IPR000157 | GO:0007165 | |
Vian11g01111 | 1050 | Gene3D | Ribonuclease Inhibitor | 752 | 834 | IPR032675 | - | |
Vian11g01111 | 1050 | Gene3D | - | 30 | 205 | IPR035897 | - | |
Vian11g01111 | 1050 | ProSiteProfiles | TIR domain profile. | 32 | 201 | IPR000157 | GO:0007165 | |
Vian11g01111 | 1050 | SMART | till_3 | 33 | 176 | IPR000157 | GO:0007165 | |
Vian11g01111 | 1050 | ProSiteProfiles | Leucine-rich repeat profile. | 788 | 809 | IPR001611 | GO:0005515 | |
Vian11g01111 | 1050 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 195 | 469 | IPR027417 | - | |
Vian11g01111 | 1050 | Pfam | NB-ARC domain | 232 | 447 | IPR002182 | GO:0043531 | |
Vian11g01111 | 1050 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 26 | 178 | IPR035897 | - | |
Vian11g01111 | 1050 | PRINTS | Disease resistance protein signature | 410 | 424 | - | - | |
Vian11g01111 | 1050 | PRINTS | Disease resistance protein signature | 651 | 667 | - | - | |
Vian11g01111 | 1050 | PRINTS | Disease resistance protein signature | 236 | 251 | - | - | |
Vian11g01111 | 1050 | PRINTS | Disease resistance protein signature | 312 | 326 | - | - | |
Vian11g01111 | 1050 | Gene3D | - | 206 | 369 | IPR027417 | - | |
Vian11g01111 | 1050 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 34 | 738 | IPR044974 | GO:0006952 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian11g01111 | Vian-Chr11 | 17675623 | 17679633 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian11g01111 | 29 | 831 | WRKY Transcription Factor Family | AT4G12020 | 28.970 | 9.23e-74 | 266 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian11g01111 | - | - | vra:106760531 | 1576.99 |