Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01107 ATGGACGTGTTGTCAGAATGCCATAAAAAGTATGGACCTATTGTTAAACTGTGGTTAGGTCCTACTCAGCTTTTGGTGTCAGTAAGGGATCCAATCTTAATCCAAGACATGCTTATAAAAGCCGAGGATAAGTTGCCTTACACGGGAAAACTGTTTCATCTGGCCTTTGGACAATCAAGCCTCTTTGCCCCTTCATTTGAAAAGGTGCAAAAGAGAAGGGAATTATTGGCAACAGAGTTAAACGAAAGATTGCTGAAGAATGGTGATATGATTCCTGTGAAAGTTGCAGACTTTATCACAGATAAAATAGAAAACATAAAAAAGAAAGGAGGTATTGATTCCAGGTTGGTTTCTCAACATATCGCTTTCACTATAATGGGTGTCACATTCTTTGGAGATGGCTTCTTGGCCTCGCCGAAGGCTGCAATGTACGAGGAACTGTTCATGACCATAGCTAAAGATGCTTGCTTTTGGGCCTCCTATAATGTTACTCCTTTCTGGAGACGTGGATTTTGGAAGTACCAATGCTTATGTACAAAGTTGAAATGCTTAACTCAAGACATCCTTCAACATTGCAGAAAAGGCTGTAAACTATCTAGCCATACTAAGCATGATGTACATAATGAAAGTTCCAATAAAGAAATGAAGTCAGCAGATGGTGCACAATGCTGTTCTGATGATGAGTTCCAAGATTACTATTTCTTTCGAGATCTTAAGGATCATCAAGATGGTAAAGAAGAATCTTGTGGGAATGTAATGCGCATGATATTTCACGGATGTCAAACTACCTCTGTTCTAATCACGGATGTATTGACTAGGCTTGTCATGCATGGGGAAATACAGGATAAGGTTTATTCAGAGATTAGAATGGTAGGAAGAAACCCATCGAAATATGAGCATGAAGATGTTTACAGGATGCCGTTGTTATTGGCTACAATTTATGAATCTGCACGTCTTCTTCCCACTGGTTCAATGCTGCAGAGATGTTCTTTGAAACATGACTTGAGCTTTGCATCTGGTGTAACCATTCCTGCTGGAGCTGTATTGGTTGTACCAGTTGAATTGGTACAGAAGGATGAATTCAATTGGGGGAGTGATGCAAGTCATTTCAATCCTTACCGATTTCTCTCAACTGTTACAAATAGATCAGGTGGTAAGAGAGAAAAAATTGTTGCTCATCTATTGCTAATCTTTGATATTGAACTCTCAGGTTCTGCTGAAGACCTTTCTAGTAGAGGATTCAGTTCATTTGTACTAAATGATCCAAACGAAAATGCAGCATTCTTGCCTTTTGGATCAGGTGCACGGGCTTGCATCGGACAGAAATTTATCATCCAACTTGTTGCCTCAGTGTTGGCATCATTGCTAAATAAATATGAGATACGGCTTAGCATAGACTCAAATGATGACTCAAACACAACCTTGAAGAATAATCTTCTGCAGCGTCATCCCAGTTCACGGATATTATTCGTGAGAAGGGACCAGTGA 1488 0.3972 MDVLSECHKKYGPIVKLWLGPTQLLVSVRDPILIQDMLIKAEDKLPYTGKLFHLAFGQSSLFAPSFEKVQKRRELLATELNERLLKNGDMIPVKVADFITDKIENIKKKGGIDSRLVSQHIAFTIMGVTFFGDGFLASPKAAMYEELFMTIAKDACFWASYNVTPFWRRGFWKYQCLCTKLKCLTQDILQHCRKGCKLSSHTKHDVHNESSNKEMKSADGAQCCSDDEFQDYYFFRDLKDHQDGKEESCGNVMRMIFHGCQTTSVLITDVLTRLVMHGEIQDKVYSEIRMVGRNPSKYEHEDVYRMPLLLATIYESARLLPTGSMLQRCSLKHDLSFASGVTIPAGAVLVVPVELVQKDEFNWGSDASHFNPYRFLSTVTNRSGGKREKIVAHLLLIFDIELSGSAEDLSSRGFSSFVLNDPNENAAFLPFGSGARACIGQKFIIQLVASVLASLLNKYEIRLSIDSNDDSNTTLKNNLLQRHPSSRILFVRRDQ 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01107 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Vian11g01107 495 Gene3D Cytochrome P450 1 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian11g01107 495 Pfam Cytochrome P450 3 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian11g01107 495 PANTHER CYTOCHROME P450 FAMILY 4 9 467 - -
Vian11g01107 495 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian11g01107 495 PRINTS E-class P450 group I signature 8 27 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian11g01107 495 PRINTS E-class P450 group I signature 247 264 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian11g01107 495 PRINTS E-class P450 group I signature 267 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian11g01107 495 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian11g01107 495 CDD cytochrome_P450 12 487 - -
Vian11g01107 495 SUPERFAMILY Cytochrome P450 3 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01107 Vian-Chr11 17558659 17566381 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01107 257 484 Cytochrome P450 AT3G14620 26.201 1.17e-17 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01107 - - vum:124847778 991.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g01107 11 17558659 17566381 Vian11g01107 11 17558659 17566381 ECH