Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01104 ATGCTAATGCCTGGTTTCAATTTCCACAGGAAAGCTCAACCAAGGATCACATTCAGAATTTTCATGCAAATTTTCATCCTTGCCCTACTTGGGCCTGTGATTGATCAAAACTTCTACTATGCTGGGTTGAAATTAACATCTCCAACTTTCTCATGTGCAATGAGTAATGTGCTTCCTGCCATGACTTTTATAATGGCAGTTCTATGCAGGATGGAGAAGTTGAACATGAAGAAGGTGAGGTGCCAAGCAAAGGTGGTGGGAACAATGGTGACTGTGGGTGGGGCCATGGTGATGACCTTGTACAAAGGACCTTTGGTGGAAATGGTTTGGACCAAACATGCCCTTCATCAGAACCAAACCAATAATGCAACAACAACAAATAACGGAACAACACCTTCAGACAAAGATTGGCTCATAGGCTCCATTTTCCTAATCATTGCTACACTTGCTTGGGCATCCCTTTTTGTTTTACAAGCCAAAGCTATTGAAACGTACAAAAATCACCAGCTAAGCCTGACATCACTGATATGCTTCTTAGGCACTATTCAAGCTATTGCTGTTACTTTTGTTATGGAACACGATCCATCAGTGTGGAGTATTGGGTGGGATATGAACTTGCTTGCTGCTGCATATGCTGGGATTGTTACATCAAGCATATCATACTATGTTCAAGGGTTGGTGATTAAGAAGAAAGGGCCTGTTTTTGCAACTGCATTTAGCCCTCTCATGATGATCATTGTAGCCATCATGGGTTCCTTTATCCTTGCAGAACACATTTTTCTTGGAGGTGTGGTTGGTGCGATCTTGATCGTTATAGGGTTATATTCAGTTCTTTGGGGAAAGCACAAAGAAGAAGTGGAAAACAAAGTGGTGGAGGATATTCCCTTACCTTTAAAGGGTGCAATGCTTCAAGCAAATAATCCAGATTCCAACAACATCTCTTCACTTGTCATTAATGTCACCACTGAACCTCCATTCAAATCTAACAGTTAA 993 0.4139 MLMPGFNFHRKAQPRITFRIFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNVLPAMTFIMAVLCRMEKLNMKKVRCQAKVVGTMVTVGGAMVMTLYKGPLVEMVWTKHALHQNQTNNATTTNNGTTPSDKDWLIGSIFLIIATLAWASLFVLQAKAIETYKNHQLSLTSLICFLGTIQAIAVTFVMEHDPSVWSIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILAEHIFLGGVVGAILIVIGLYSVLWGKHKEEVENKVVEDIPLPLKGAMLQANNPDSNNISSLVINVTTEPPFKSNS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01104 330 PANTHER WAT1-RELATED PROTEIN 8 289 IPR030184 GO:0016020|GO:0022857
Vian11g01104 330 Pfam EamA-like transporter family 139 278 IPR000620 GO:0016020
Vian11g01104 330 Pfam EamA-like transporter family 7 97 IPR000620 GO:0016020
Vian11g01104 330 SUPERFAMILY Multidrug resistance efflux transporter EmrE 198 283 - -
Vian11g01104 330 SUPERFAMILY Multidrug resistance efflux transporter EmrE 15 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01104 Vian-Chr11 17507064 17510250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01104 5 320 Nodulin-like Gene Family AT5G07050 66.667 1.45e-154 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01104 - - gmx:100804359 502.286