Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01102 ATGGAATCGCCACAGCCAGGTTCAAGAGGAGCAGAAGCTCTTAAACATGTAGCTCCTGGTTCATCTATTTCTGTTAAATATCACCCACTTTTTGGACCTCATGATGACCTCCTCCTTCTAGAGCTTGATGAGAAACTTCTCCCAGATGTTCTGCATGAAAGGGTGGTCTTGAGAGGACAGCCTGATGAAGATGCAGTTCTTTGTACTCAATCCAAAACATATGCTATGAAGTTTGTTGGAACTTCCAATTCGGTTCTGCTTGTACCACCAGCGAATCATTCAGAATTTCGTGAAAATCCACAAAAGAATGATAGTAATAAGGAAGAAGAGAAAGTTGTTGCACCTGTAATCAAAGTTGTATCTGGTAATATGGAGCTTGTCGAGGCAGCCCCCAGACTTGATAAACTTAAGTCTTTACTATTAGAAAAGACTTACAATTTTGAGGACTATGATGTGGGAAATTTAGAAGACAACCAGGAATCTACAATAGGATTATATAGCTGGAATGATCTTGTCCACAATATCCAAGCTAGTGATGAGGAGTTAAGGTCTGGACTGCAGGCTCTTTCCGCAGTGGAGATTAATGGATATTGGAGATTAGTAGATGGGAGTTACATGGACATGATTCTTGGAATGCTTTTGAAAAATTCGGTGTTAAATGATTGGTCACTTAATGCTTTAAACGAAGATGAAGTTGTGAGTACACTGGTATCAGATGGATTTCCTGGGGTGCTAGCAAGGCATTGTTTCCATACATATGGCACCAAAGTAAATGAAGGCATGCCTGGCTGTGCCTGGAAATTGGACGAGAAGCGAGTATGTATCCATTTTGCAAGAGAAATCCTGAAAGGGGGTAAAAGGAAGTTAGAGAGTTTCATGGATGAATGGAGGCAGAAGGTTCCAGATGGAATGCAGCCCAGTATTGATCTTGTGGAAGGAGAGGTATTAATAGAGAGAGTTGGAGTTGAGACATGGATTCGTGCCTTCAGCGTCGCATCTTTGCCTTCGACTCCAGCTGAGCGTTTCACCATTCTTTTCAGAGAGAGGACAAAATGGGAATGGAAAGATCTGCAGCCGTATGTCAGAGATCTGAAGATACCAGGTCTTTCTTCAGAAGGTTTGCTACTCAAATACACTCGAAGGACGCAACCATCGCCTGATGCGGAACCAGTTTTCAGCGCAAGATAG 1188 0.4242 MESPQPGSRGAEALKHVAPGSSISVKYHPLFGPHDDLLLLELDEKLLPDVLHERVVLRGQPDEDAVLCTQSKTYAMKFVGTSNSVLLVPPANHSEFRENPQKNDSNKEEEKVVAPVIKVVSGNMELVEAAPRLDKLKSLLLEKTYNFEDYDVGNLEDNQESTIGLYSWNDLVHNIQASDEELRSGLQALSAVEINGYWRLVDGSYMDMILGMLLKNSVLNDWSLNALNEDEVVSTLVSDGFPGVLARHCFHTYGTKVNEGMPGCAWKLDEKRVCIHFAREILKGGKRKLESFMDEWRQKVPDGMQPSIDLVEGEVLIERVGVETWIRAFSVASLPSTPAERFTILFRERTKWEWKDLQPYVRDLKIPGLSSEGLLLKYTRRTQPSPDAEPVFSAR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01102 395 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 10 395 IPR019128 GO:0007064|GO:0031390
Vian11g01102 395 Pfam Sister chromatid cohesion protein Dcc1 38 361 IPR019128 GO:0007064|GO:0031390
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01102 10 395 C3H Transcription Factor Family AT2G44580 56.633 6.23e-163 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01102 K11271 - gmx:100817511 672.93