Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01071 ATGGCACAGTTACCTCCCAAAATACCAACCATACCCCAAAATTGGCCATCTTTTTCTCACCAAAGGGTGCCCACAATGGCCAACTTCACACCCACAACCTCATCCACCACCACCACCACCGTCGCCGCCGCCGCCACCACCACGGCTCCCTCCCAACCCTCATGGGTCGACGAATTCCTTGACTTCTCCTCGACCCGGCGGGGGGCTCACCGGCGATCCGCCAGCGACTCCATTGCCTTCCTCGAGACGCCGTTTCTCGAGGAATGTCGAGCCGGTTTCGACCGGCTCGACGAGGACCAGCTGATTTCCATGTTCTCTGACGACATTTCAGCAGCGGCACTACCACCGCCACCGCTTTCATCGGCGTCCAACCCCTCCTCGCCGTCCTCCGACCAAAATAGCAACAACGAGGAGAAGCCCATGGCAATGACGTTGGACCTCAAGCCGAAGACGGAAAAGGTTGAAGAGGAGAGCTCGTGCAAGAATGAGGCGGCGGCGCTGCAACTCTCCGCCACTACCACCTCCCCTGAAACAGTTGTCGATCCCAAGAGGGTCAAAAGAATTTTGGCTAACAGGCAATCAGCACAGAGATCAAGAGTAAGAAAACTACAATACATCTCTGAGCTTGAAAGGAGCGTAACAACATTACAGACGGAAGTATCAGCATTGTCTCCACGAGTTGCATTTCTGGACCATCAACGTTTGATTCTTAATGTCGACAATAGTGCCTTGAAGCAACGTATTGCTGCTTTGGCCCAAGACAAGATTTTCAAAGACGCTCATCAAGAGGCATTGAAGAAGGAAATAGAGAGATTGAGGCAAATCTACCACCAACAGAACCTACAGAAGATGAGTAACACATTGAACAACAATCTTCAAAACCCATCAACATCACAGCCACAAGCAACTATTCAATCACATTCCCTTCATCAGCATCAGCATCAGCAGCAGATAGCAGTGTCTCAACCATTGGGATGCAAGGACAAGGAGCAGCTCCTGAGTTGA 1005 0.5154 MAQLPPKIPTIPQNWPSFSHQRVPTMANFTPTTSSTTTTTVAAAATTTAPSQPSWVDEFLDFSSTRRGAHRRSASDSIAFLETPFLEECRAGFDRLDEDQLISMFSDDISAAALPPPPLSSASNPSSPSSDQNSNNEEKPMAMTLDLKPKTEKVEEESSCKNEAAALQLSATTTSPETVVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQIYHQQNLQKMSNTLNNNLQNPSTSQPQATIQSHSLHQHQHQQQIAVSQPLGCKDKEQLLS 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01071 334 Coils Coil 262 282 - -
Vian11g01071 334 MobiDBLite consensus disorder prediction 287 321 - -
Vian11g01071 334 Pfam bZIP transcription factor 183 228 IPR004827 GO:0003700|GO:0006355
Vian11g01071 334 MobiDBLite consensus disorder prediction 124 139 - -
Vian11g01071 334 SUPERFAMILY Leucine zipper domain 183 237 IPR046347 GO:0003700|GO:0006355
Vian11g01071 334 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 186 201 IPR004827 GO:0003700|GO:0006355
Vian11g01071 334 Gene3D - 182 235 - -
Vian11g01071 334 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 181 233 IPR004827 GO:0003700|GO:0006355
Vian11g01071 334 SMART brlzneu 179 243 IPR004827 GO:0003700|GO:0006355
Vian11g01071 334 MobiDBLite consensus disorder prediction 112 139 - -
Vian11g01071 334 FunFam Basic leucine zipper 61 182 255 - -
Vian11g01071 334 PANTHER BASIC LEUCINE ZIPPER 34 1 306 - -
Vian11g01071 334 CDD bZIP_plant_RF2 184 234 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01071 Vian-Chr11 15198330 15200806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01071 1 261 bZIP Transcription Factor Family AT3G58120 53.220 4.52e-84 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian11g01071 bZIP_1 1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01071 - - gmx:100820197 456.832