Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01068 ATGGTTGAGACGCACAGTTGCGGCGAACACATGAAGAAACCGAAGCAAACTCAGTTGAATCCCAATTGGCTTCAACTACAACAAAAGCTGAATGACTCCAAGGCTTCAAGGACCTTCAAAAATTCAGACAAAGTTACCCCGGAATCAATATTGGGGAAACGTAAAGAGAGACCAGACGAGGAATCCAATGATAGTCAGATTAATCCTCTTACTCCTGTAAATGATGATTCAAGTCTGACAGATGCAGTGGCCATGGATTGTGAAATGGTTGGCGTTGGTCAAGGAAACAAAAGTGCTCTTGGAAGAGTAACTCTGGTCAATAAGTGGGGAAATGTTATTTATGACGAGTTTGTTCGGCCAATGGAACGGGTTGTTGACTTCCGTACTAAAATCAGTGGCATAAGGCCTCGAGATCTTAGAAAAGCAAAGGATTTTTGGACTGCTCAGAAGAAAGTGTCAGAGTTGATCAATGGAAGGATCCTTGTTGGTCATGCCTTGTCCAATGACTTTAAGGCATTGTTATTAAGTCATCCCAAAAAGGATATAAGAGACACCTCCGAGTATCAACCATTTCTAAGATCAAGTAGCAGAAGAGCACTGCGACATCTTGCTGACGAACATCTCGGTGTGCAGATCCAAACAGGAGAGCACTGCCCAATAGAAGATGCTCGTGCTGCTATGCTGCTTTACCAAAGACATAAGAAGGAGTGGGAAAAGAGCATAAAAGATCAATTTCGGTTGAAACAGAAGCAGAGGAAATCGAAGCAGAAAAAGAAGCACAAGATTGAAGAAGCTTCAAATGCAAACCATGTTGAAATTGAATCATAG 828 0.4215 MVETHSCGEHMKKPKQTQLNPNWLQLQQKLNDSKASRTFKNSDKVTPESILGKRKERPDEESNDSQINPLTPVNDDSSLTDAVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTKISGIRPRDLRKAKDFWTAQKKVSELINGRILVGHALSNDFKALLLSHPKKDIRDTSEYQPFLRSSSRRALRHLADEHLGVQIQTGEHCPIEDARAAMLLYQRHKKEWEKSIKDQFRLKQKQRKSKQKKKHKIEEASNANHVEIES 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01068 275 Gene3D - 77 259 IPR036397 GO:0003676
Vian11g01068 275 MobiDBLite consensus disorder prediction 260 275 - -
Vian11g01068 275 FunFam Interferon-stimulated exonuclease gene 20 78 249 - -
Vian11g01068 275 SUPERFAMILY Ribonuclease H-like 82 238 IPR012337 -
Vian11g01068 275 MobiDBLite consensus disorder prediction 243 275 - -
Vian11g01068 275 MobiDBLite consensus disorder prediction 1 78 - -
Vian11g01068 275 Coils Coil 248 268 - -
Vian11g01068 275 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 34 257 IPR047021 GO:0004527
Vian11g01068 275 MobiDBLite consensus disorder prediction 36 63 - -
Vian11g01068 275 Pfam Exonuclease 83 230 IPR013520 -
Vian11g01068 275 CDD REX4_like 83 231 IPR037431 GO:0006364|GO:0008408
Vian11g01068 275 SMART exoiiiendus 81 239 IPR013520 -
Vian11g01068 275 MobiDBLite consensus disorder prediction 13 35 - -
Vian11g01068 275 MobiDBLite consensus disorder prediction 64 78 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01068 82 236 C2H2 Transcription Factor Family AT5G40310 37.427 2.20e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01068 K18327 - gmx:100819122 441.425