Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01062 ATGGTGGGCTATGGAGGATGGGTCAAGAAAACAAATTTCAGAGAAGGAAGCACTGAAAAAACGAAGAGACTCTGGGAACCCCAAATCCCAGAAACTCAGTCTTCGCTGGAAAATGGAGAACAAGCTTTAATCGAACCGAAACCTCGCCCAAGAAGATGCGTCGCTGATTCGATTTCTAGGGTTTCGGTTTCTCTCTCCCCGCCTTGGACCAACTGTGGCAAACGTTGCAACGGCCATGGTTTTCTGCCGAATCGGAGCACATTCGAACACCCAATTGGACGGAGAAGACAATCGGCGAATGCCCATTTGCTAGTTTCCGAGAGAGCCAAAAACTTTTCCGTGTGGCGATTCCTGCGCTTTCTGGTCATGCGATCATCGCCGTCTTCATTGGGTTCGTCGTCTCGATCGGGTTTGCGGCTTCGTAAGAAGCACAAGAGGTTGGATGCAATATGTGAGGAGGAGTACACTCGGAACCATGGTGAGTTGAATGATGATAATGATGGGTTGAATCCCGATGCAGGAGTTCGTCGGAGCTCCCGGGTTCGCCGTGCCCCGGTTCTGCTCGACGCATCTCCCGCTCCGCCGAAGAAGCGACGGAGGCTGCGGAAGGGTGGATTTGATCGTGGCGGGGAGAGTCCTATGAGTTTAGGGCGGGAAAATAGAGGTTCAGGTGGGTCTTGGAGTTCTAGGCTGAGATCAAGGGTTGGCAATGTAAGTTTTAGGGTAAAAGAGGAGGGGGAATCGCCACGTGGGAAGAGAAAGCTTTTTGAGGGTGTGGTGGGAAAGAAGGGTGATGATGAGGTTGGTAAGAAGGAGGAGTTGGAAGGTTTGATGCCGAAAGTGGTTAAGTCGAAAAGACCGGGGAGGATTAAAGCCACGAAGCACGATGAAGGGCATGAAGATGATGTGTCTCATGGGAGTTTGGAGGGGAGTAAGAGTCAGGAAGTGGTGCTTCTGTCGAGTAGTGACGAGGAGAGTGATTCTGAATCGGAAACTGAATTGTCGGGAGAGGATCAGATGTACGAATCAGATGGAAATGCCCCTTCTATGGTAGGAAATGAGGATGGGGATCAGATGACTGATTCGGATGGGAGTGCCCCTCTCATGGTAGAGAATGAGGAGAGGAACTTATCCAACGATTTGCAAATGAAGGAGTGTGGCGATGACATTGAATCGTCGTCTCAGGTGGAACGTGAAGAAAAAGTGGATTATCAGTTAGAGGGTGGGAAGGAAAGTGAAAGTGTTGGTAATGCAGCTGAACAGGTAGATAATGAAGGATTCGTTGGTAAGGAGGTTGATGATGGTGAAAATTTCTTGAAAGATGCCAATGTTGATAAGGAGGATGATGTCAATGAAAATGTCTTGAAAGGTGTAAGTGCTGGCAGGAACGATGAGTTGAAACATGCTTCAAATGACAAGCGTGGTCACCTGCGTATCAAAGAGGGCAGGCGGTGTGGTTTGTGTGGTGGAGGGAGTGATGGTAAGCCTCCAAAAAGGTTAGCTCATGATAATGGTGAAAGCGAGAATGAAGCTTATAGTGGATCGTCATCTTCAGAGGAGACTAACTATGATATCTGGGATGGTTTTGATGATGAACCTGGTTGGCTTGGTCGTCTCTTGGGTCCTATTAATGATTACCATGGTATTACTAGAATATGGGTTCATCTGCACTGTGCTGTATGGAGTCCAGAGCCTTGTGCCAGAGCTAGTGGTTGTATCTTTGACCATCGTAAGTTTCTCATTGCCTGCACAGATCATCGGCATCTTTTCCAATCTCGTGGTAGTAAATATTTAGCCCGGATAAAGAAGTTGAAGGCTAGGAAAATGATGTGGGAGATAAGGAAACGATCAAATGAAGCTTGTAGAAAAGATATTGGAGATGAAGAGAGATGGTTGGAAAATTGTGGAGAGGATGAAGAATTTTTGAAACGTGAGAACAAGAGGCTTCAACGTGATTTATTGAGAATAGCCCCAGTGTACATTGGGGGTTCAGACTCTGCCTGTGAAAATTCATTTCAGGGTTGGGAATCTGTTGCTGGGCTCAGAGATGTCATCCGTTGTATGAAAGAAGTTGTCATTTTACCTCTGTTATATCCTGAGCTATTTGATAATTTAGGGCTTACACCACCAAGAGGTGTTCTTTTGCATGGGCATCCTGGAACGGGGAAAACCTTAGTTGTCCGTGCATTGATAGGTGCATGTGCCCGTGGTGATAAACGAATTGCATATTTTGCCCGGAAAGGTGCAGATTGCTTGGGAAAATATGTTGGTGATGCCGAGCGTCAATTAAGACTATTGTTTCAGGTTGCTGAGAAATGTCAACCTTCTATAATATTCTTTGATGAAATAGATGGTCTAGCACCCCTTCGCACTAGGCAGCAAGACCAGACACATAGTTCTGTTGTGTCAACATTGCTTGCTCTTATGGATGGTCTGAAGTCTAGGGGTTCAGTTGTGGTCATAGGTGCAACAAACCGTCCTGAATCTGTTGACCCAGCGCTTAGGCGCCCTGGTAGGTTTGATCGGGAAATTTATTTCCCATTACCATCAATTGAGGACAGAGCTTCCATTCTCTCACTTCACACTCAAAAGTGGCCAAAACCAATTACCGGATCCTTGCTTGAGTGGATTGCAAGAAAAACACCAGGCTTTGCAGGTGCTGATCTCCAGGCTCTTTGTACCCAAGCAGCTATTAATGCGTTGAAGAGGAATTTTCCATTGCAAGAAGTCTTGTCTTTAGCTGCCCAAGAAAAACATTCTGGTTCTAAGCCAATTCCTCTTCCATCCTTTGCAGTGGAGGAGAGGGACTGGTTAGAGGCTGTTTTTTCTTCCCCACTACCCTGCTCTCGAAGAGATGCTGGAAATGCTGCCAATGATGTAGTATGCTCCCCTCTTCCAATCCAGCTTACTCCTTGTTTATTGCAGCCATTGTGCACTCTTCTTGTATCTCTACATCTTGATGAACGTCTATGGTTACCACTTCCCATATTAAAAGCTGTAACTGTGATAAAGGATGCTACGATTTCTGCTCTGGAAAAAAAGAAAAAGCCTTTTGATCACTGGTGGTTGCATATGGATGAATTTCTTCACGAATACAACACTGTTCATGAGTTAAAGAGACATCTTACTTGTTCTGGTATTTTATCTGAGGTTGATGGCATTTTTGGTTCTAATGATACTGTGGGTGATACTAATGATAGCAAGTTGAGGCTAGAATCCCCCTCAAGGAACCATCTTGGCATGCGTAGTGGTTTATTTGCATTGACCAACAAAGCAGGATTTCGGATACTAATTTCTGGAGATCCTCGATCTGGCCAGAGACATCTTGCATCTTGTCTTCTTCACTGCTTTATTGGAAATATTGAAATACAGAAGATTGATATGGCAACTATTTTACAAGAAGGGCATGGAGAAGTGGTGCAGGGGATTGCACAAATATTAATGAAATGTGCTAGCAGGCAATCTTGCGTAGTATTCTTGCCAAAAATTGATTTATGGGCTCTGGAGAAACATTTTCAAATCTCTGAAAGGACTGATTCGTGTTTAAAGAGAGGCAAGTCCTACTTCACACCAAACCAAGTTGTTGTGAAGGAAAGAGAGATCAATAATGAGAAAAACTCAACTGAGATGGCGAATGGCCAAGCCATCACAAAGGCTTCATTTGCTTGGATGTCATTTGTTGAGCAGGTGGAATCCATTGGTGTATCCACATCCTTGATGATTCTGGCTACTTCGGAAGTTCCCTACAAAGAACTTCCTTGCAAAGTAAGAGAATTCTTCAAGAGTTATCAATCTAGAGACAGCCAGTCAACTCCATTGGAGCATACAGTTCCTCGTTTCTCTGTGCAGATTGATGGGAATTTTGACCATGACATGTTGATCAATTTATCTGCACTAGAGCTATTGAGAAATGTAGTTAAGCAGCTGGTTCAATTGATTCATCAGAGATCTCATGCTCATACAGGTAGCCAAAAGGGCCACAGAACCTGTGAATCAATTGAAATTTGTCAAAAAAAGGTATGTCAAAGAAAAGATGGATCAGACAAAAAGAGTGAAATCCAACTCGAGTCCTTTACAAAAGTATCACCAACACCAACCAGCAAGTCATTGAAGGGAAAGTCAACCCTGTTGTTGGCAATATCTACACTTGGTTATCAAATTCTCTTATACCCTCACTTTGCTGAACTTTGTTGGGTCACTTCAAAACTCAAAGAAGGTCCTTGTGCTGATGTAAGTGGACCTTGGAGGGGATGGCCTTTCAATTCTTGTATAATTCGTCCTAATAATTCACACGACAAGGTTGTAGTTTCTTGTAATTCTGGTAGCATTAAAAGCAGAGAAGCATCTGGTCTAGTCAGAGGCTTGATTGCTGTTGGTTTATCAGCTTACAGAGGTGTTTATAGATCAGTTAGGGAAGTTTCCCTGGATGTAAGGAAGGTTCTTGAGGTCTTAATTGAGAAAATCAATACCAAAATTCAAGCTGGGAAAGATAGATATCAATATTTTCGTATTTTATCTCAAGTGGCTTATTTAGAAGACATGGTCAACAACTGGGCTTACTCATTGCTAAGTCTGGAGCAGGATTCCCATGAGCATACAACAAAGGTTACACCAGCAAGTGGTGGGTTATTAAACAGTCATCACATTAGTGAAAAACGCCAAGCAGAAGGCGAGGACTGCCATGTTTCTGTTGCTGGAGATGGTCATGATTTGAAGACATTGGAGGAAAGTCATAACGGAATTCCTGCTGAAATGGCGGGGTGTATTGCCTCTAACCAAAATGGTAATTTAGATATTGATTGTGATGATGGAAATGCTAGTTCTGAAGGATCTCTACAGAACCATTATTTTTCTGAAAAGCATATCAACAACTCTGCTGGTGCTGCTATGATTGCAAACCAACCTCTTTATCCGGCTACAAGTCAGGAGAATGGAACACTATTAGTACAACATGAATCTCTGACGGCTAGAAATAATGAAGAGGTGCGTGAAAAACTAGGGATTTCAAATAACTTCAGCAAATCCATGGGCACTCAAACTGTGGTTCTTTCTGCAAACGGAGTTCACACTACTTTGGAACCAGAGAAACAGAATATTGAGATTGGTAACGGTCCTGTCTCTGATCAGCCTCTTATTGTGTCCTCATCCTCGCAAGACACTGGTGCAACATTAAGTGATATCAAATCTGACAAACATGATAATGCTCCTGACAATGATGCCTCTTCAAGTAATGGTAGTGTTCCTGCTGAATCGGGGGTTATATGCTTGTATCAATGTTGCCCCGCATGTCTCCACAGTCTCTATCATTTGACAAAGAAAATGCTTCTTAAAGAGTGGGGGATGAACGGGGACCAGTGGAGTATAGAAGATGTTCATGATGCTGTTGCAACATTATCTGTGGATCTTATTTCAGCAGTTAGAAAAAGCTTTGTGGCTGAAGATTTCAATGCTTCATTAAATAAAACCTCAAGGCATGAAAATCATGAAACATCTCTTGATTGTTGGAACCAGAGAACGTGTAATGCTGAAAACCAAGGCAAGGATTTAGTGCCTGTCGAATGTATTTTTCACTCTGCAAGCGAACATGCAACTGCAATTGAAGATAAGGCACTGAATGATCTTAAATTTCTTTTCAGAGATGGTGTACTTGTTCATATGGACCCTGACAAGGATGTCTCAGTTCACTGTAAATTTCAGAACTTGTGCCTTTGTTCTCTTAGAGAGTTGATAATAATGACAAAGCGACCTTTTGATTAG 5757 0.4327 MVGYGGWVKKTNFREGSTEKTKRLWEPQIPETQSSLENGEQALIEPKPRPRRCVADSISRVSVSLSPPWTNCGKRCNGHGFLPNRSTFEHPIGRRRQSANAHLLVSERAKNFSVWRFLRFLVMRSSPSSLGSSSRSGLRLRKKHKRLDAICEEEYTRNHGELNDDNDGLNPDAGVRRSSRVRRAPVLLDASPAPPKKRRRLRKGGFDRGGESPMSLGRENRGSGGSWSSRLRSRVGNVSFRVKEEGESPRGKRKLFEGVVGKKGDDEVGKKEELEGLMPKVVKSKRPGRIKATKHDEGHEDDVSHGSLEGSKSQEVVLLSSSDEESDSESETELSGEDQMYESDGNAPSMVGNEDGDQMTDSDGSAPLMVENEERNLSNDLQMKECGDDIESSSQVEREEKVDYQLEGGKESESVGNAAEQVDNEGFVGKEVDDGENFLKDANVDKEDDVNENVLKGVSAGRNDELKHASNDKRGHLRIKEGRRCGLCGGGSDGKPPKRLAHDNGESENEAYSGSSSSEETNYDIWDGFDDEPGWLGRLLGPINDYHGITRIWVHLHCAVWSPEPCARASGCIFDHRKFLIACTDHRHLFQSRGSKYLARIKKLKARKMMWEIRKRSNEACRKDIGDEERWLENCGEDEEFLKRENKRLQRDLLRIAPVYIGGSDSACENSFQGWESVAGLRDVIRCMKEVVILPLLYPELFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGACARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPLRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPESVDPALRRPGRFDREIYFPLPSIEDRASILSLHTQKWPKPITGSLLEWIARKTPGFAGADLQALCTQAAINALKRNFPLQEVLSLAAQEKHSGSKPIPLPSFAVEERDWLEAVFSSPLPCSRRDAGNAANDVVCSPLPIQLTPCLLQPLCTLLVSLHLDERLWLPLPILKAVTVIKDATISALEKKKKPFDHWWLHMDEFLHEYNTVHELKRHLTCSGILSEVDGIFGSNDTVGDTNDSKLRLESPSRNHLGMRSGLFALTNKAGFRILISGDPRSGQRHLASCLLHCFIGNIEIQKIDMATILQEGHGEVVQGIAQILMKCASRQSCVVFLPKIDLWALEKHFQISERTDSCLKRGKSYFTPNQVVVKEREINNEKNSTEMANGQAITKASFAWMSFVEQVESIGVSTSLMILATSEVPYKELPCKVREFFKSYQSRDSQSTPLEHTVPRFSVQIDGNFDHDMLINLSALELLRNVVKQLVQLIHQRSHAHTGSQKGHRTCESIEICQKKVCQRKDGSDKKSEIQLESFTKVSPTPTSKSLKGKSTLLLAISTLGYQILLYPHFAELCWVTSKLKEGPCADVSGPWRGWPFNSCIIRPNNSHDKVVVSCNSGSIKSREASGLVRGLIAVGLSAYRGVYRSVREVSLDVRKVLEVLIEKINTKIQAGKDRYQYFRILSQVAYLEDMVNNWAYSLLSLEQDSHEHTTKVTPASGGLLNSHHISEKRQAEGEDCHVSVAGDGHDLKTLEESHNGIPAEMAGCIASNQNGNLDIDCDDGNASSEGSLQNHYFSEKHINNSAGAAMIANQPLYPATSQENGTLLVQHESLTARNNEEVREKLGISNNFSKSMGTQTVVLSANGVHTTLEPEKQNIEIGNGPVSDQPLIVSSSSQDTGATLSDIKSDKHDNAPDNDASSSNGSVPAESGVICLYQCCPACLHSLYHLTKKMLLKEWGMNGDQWSIEDVHDAVATLSVDLISAVRKSFVAEDFNASLNKTSRHENHETSLDCWNQRTCNAENQGKDLVPVECIFHSASEHATAIEDKALNDLKFLFRDGVLVHMDPDKDVSVHCKFQNLCLCSLRELIIMTKRPFD 1918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01062 1918 Coils Coil 632 652 - -
Vian11g01062 1918 MobiDBLite consensus disorder prediction 1694 1745 - -
Vian11g01062 1918 MobiDBLite consensus disorder prediction 159 230 - -
Vian11g01062 1918 MobiDBLite consensus disorder prediction 256 434 - -
Vian11g01062 1918 Pfam ATPase family associated with various cellular activities (AAA) 713 848 IPR003959 GO:0005524|GO:0016887
Vian11g01062 1918 Pfam AAA+ lid domain 874 906 IPR041569 -
Vian11g01062 1918 FunFam ATPase family, AAA domain-containing 2 672 855 - -
Vian11g01062 1918 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 849 942 - -
Vian11g01062 1918 MobiDBLite consensus disorder prediction 256 282 - -
Vian11g01062 1918 Gene3D - 849 919 - -
Vian11g01062 1918 SMART AAA_5 709 850 IPR003593 GO:0016887
Vian11g01062 1918 MobiDBLite consensus disorder prediction 1694 1724 - -
Vian11g01062 1918 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 675 906 IPR027417 -
Vian11g01062 1918 MobiDBLite consensus disorder prediction 377 408 - -
Vian11g01062 1918 MobiDBLite consensus disorder prediction 488 520 - -
Vian11g01062 1918 ProSitePatterns AAA-protein family signature. 818 836 IPR003960 GO:0005524|GO:0016887
Vian11g01062 1918 Gene3D - 674 848 IPR027417 -
Vian11g01062 1918 MobiDBLite consensus disorder prediction 290 308 - -
Vian11g01062 1918 PANTHER AAA DOMAIN-CONTAINING 568 1822 IPR045199 -
Vian11g01062 1918 MobiDBLite consensus disorder prediction 322 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01062 Vian-Chr11 14924920 14934688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01062 675 910 Calmodulin-binding Proteins AT3G56690 40.756 4.60e-45 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01062 - - gmx:100803849 2690.99