Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01045 ATGGCTGACGTGGCAGGTCTAGTTGAGGCAGCGGGATCGAGATTCACTTCATTGGAGCTTATTGGGCAGGGATCGTTTGGAGACGTCTATAAAGCGTTTGATAAGGAGCTCAACAAAGATGTCGCCATCAAAGTGATTGACTTGGAAGAATCGGAGGATGAAATTGATGATATCCAGAAGGAAATTGCTGTTTTGTCTCAATGTCGATGTCCATACATTACTGAGTATTATGGTTCCTATCTCAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGTGGTTCAGTTGCTGATCTACTCCAAGCAGGTAATCCCCTTGATGAAATGTCAATTGCTTGCATTCTGCGTGACTTGCTGCATGCTGTTGATTATCTACACACTGAAGGGAAAATTCACAGAGACCTTAAAGCTGCAAACATTTTATTGTCTGAGAATGGTGATGTAAAGGTAGCAGATTTTGGCGTTTCTGCACAGTTAACAAGGACTATATCAAGGAGGAAGACATTTGTAGGAACGCCATTTTGGATGGCGCCTGAGGTTATTCAGAATACTGATGGATATAATGAGAAGGCAGATATTTGGTCTTTGGGAATCACTGCTATTGAGATGGCAAAGGGGGAGCCTCCACTAGCCGATCTTCACCCAATGAGAGTGCTTTTCATCATACCCCGGGAGAATCCTCCGCAGCTAGATGATCATTTTTCCCGTCCAATGAAAGAATTTGTCTCATTGTGCTTAAAGAAGATTCCTGCCGAGAGGCCAAGTGCTAAGGAACTTTTGAAGGACCGTTTTATTCGGAATGCTAGGAGGAGTTCAAAGCTTGTAGAAAGAATAAGAGAACGTCCAAAATATCAAATAAAGGAAGAAGATCTGGAAACACCTAGAAATGTCTCAAGAGGGATAGGGGAAGGATCAGATACTGTAAAAGTGGCTAGAGATGTAAGAGGTGAAGAAAATAATCGACCCAGTGATCAGGGTAAAACCCTGAAAAGTGCTGGATGGGACTTCAATATTGGTGGATCACAGGGTACTGGAACCTTTCGTAATGTTTCTCGACCACCTCAGTTTAGAGAGAAGAAAGCTGAAGCATCACATAATCAGGTAACCCAAAGAAAAGCTCCTGAGAGTGGTTATCAAGGGGGATCTGCTAATAGAAGGGCACTTAGTGAGTCACTTGAAAGTTCCTCTGGAAGAGATCGAGTTCCCCACCATGATGAGCATCTGGACAATCACACTGAAGATGATGAATTATCCGGAAATGGATCAGGAACGATTGTTATTCGATCGCCAAAAGGGTCAAGGTCATCTATATTCGGTGACCAGAGCTCTCAAGTATGA 1344 0.4278 MADVAGLVEAAGSRFTSLELIGQGSFGDVYKAFDKELNKDVAIKVIDLEESEDEIDDIQKEIAVLSQCRCPYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQAGNPLDEMSIACILRDLLHAVDYLHTEGKIHRDLKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNTDGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDDHFSRPMKEFVSLCLKKIPAERPSAKELLKDRFIRNARRSSKLVERIRERPKYQIKEEDLETPRNVSRGIGEGSDTVKVARDVRGEENNRPSDQGKTLKSAGWDFNIGGSQGTGTFRNVSRPPQFREKKAEASHNQVTQRKAPESGYQGGSANRRALSESLESSSGRDRVPHHDEHLDNHTEDDELSGNGSGTIVIRSPKGSRSSIFGDQSSQV 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01045 447 FunFam serine/threonine-protein kinase dst1 isoform X1 12 301 - -
Vian11g01045 447 MobiDBLite consensus disorder prediction 419 447 - -
Vian11g01045 447 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 11 402 - -
Vian11g01045 447 MobiDBLite consensus disorder prediction 289 447 - -
Vian11g01045 447 SUPERFAMILY Protein kinase-like (PK-like) 12 288 IPR011009 -
Vian11g01045 447 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g01045 447 MobiDBLite consensus disorder prediction 308 326 - -
Vian11g01045 447 Coils Coil 41 68 - -
Vian11g01045 447 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Vian11g01045 447 CDD STKc_MST3_like 13 287 - -
Vian11g01045 447 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g01045 447 MobiDBLite consensus disorder prediction 369 393 - -
Vian11g01045 447 Gene3D Transferase(Phosphotransferase) domain 1 12 301 - -
Vian11g01045 447 MobiDBLite consensus disorder prediction 394 418 - -
Vian11g01045 447 MobiDBLite consensus disorder prediction 337 353 - -
Vian11g01045 447 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01045 Vian-Chr11 14446563 14469256 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01045 1 445 MAP Kinase Kinase Kinase Kinase AT3G15220 73.318 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Vian11g01045 Pkinase 8.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01045 K08838 - gmx:100815042 805.823