Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01042 ATGTTATTATCTTTCAGCTATCTCCGATCTGTGGGAAACATTTCACTGAAACTGATATGCATCTTTGTTTCCGGTATGAGAAAAGTAACCTATCTCACTGTTGAGATAAAGTTTTCCTGTTGTAATGGAGAGGGTTGGGAGGGCACCACTGGTTTCTCTGGTCAGAACATATTTCTTTACATATGGTCTTCAACCTTCAGAATTGAATGCATCTTCTTAATGACCATAGAACTATATGGCAAGGTAAAAGTTGGTTTGGGTTCATCAGACCCTGATTCGGGGAAAGGCAAGAGCAAGATGTCGAAGAACATAACTCATGGCTTTCACTTGGTAAAAGGAAAATCATATCATGACATGGAGGATTATGTTGTTGCTCAATTTAAGCAAGTAGACAGCAATGAATTGGGTTTGTTTGCAATATTTGATGGACACGCAGGTCACAATGTACCTAATTACCTACAGTCTCATTTGTTTGATAATATCTTAAAAGAGCCTGACTTCTGGAAAGAACCTGCAGATGCTGTCAAGAGAGCTTACAGTAAAACTGATTCTAATATTTTAGAGATGTCGGGTGAATTAGGTAGAGGAGGTTCAACTGCAGTTACAGCCATATTAGTCAATTGTCAGAAGTTAATAGTAGCCAACATTGGGGATTCCAGGGCTGTCTTATGCAAGAAGGGTGTGGCCAAACAATTATCAGTGGATCATGAGCCAAACACGGAGCATGAAGATATAAAAAATAGAGGTGGTTTTGTATCAAACTTTCCAGGGGATGTTCCACGGGTTGATGGACGGCTGGCTGTGTCAAGGGCTTTTGGTGACAAAAGCCTGAAGAAACATTTGAGTTCAGAGCCATTTGTGACAGTGGAGAATATAAATGATGATGCAGAATTCATTATATTAGCCAGTGATGGATTATGGAAGGTCATGTCAAATCAAGAAGCAGTTAATTGTATCAAAAATATAAAGGATGCTCGGTCTTCAGCAAAGCGCCTTACCGAAGAAGCAGTTAACAAGAAAAGCACTGATGATATCTCGTGCATTGTTGTCAAATTTCAGTGA 1062 0.3945 MLLSFSYLRSVGNISLKLICIFVSGMRKVTYLTVEIKFSCCNGEGWEGTTGFSGQNIFLYIWSSTFRIECIFLMTIELYGKVKVGLGSSDPDSGKGKSKMSKNITHGFHLVKGKSYHDMEDYVVAQFKQVDSNELGLFAIFDGHAGHNVPNYLQSHLFDNILKEPDFWKEPADAVKRAYSKTDSNILEMSGELGRGGSTAVTAILVNCQKLIVANIGDSRAVLCKKGVAKQLSVDHEPNTEHEDIKNRGGFVSNFPGDVPRVDGRLAVSRAFGDKSLKKHLSSEPFVTVENINDDAEFIILASDGLWKVMSNQEAVNCIKNIKDARSSAKRLTEEAVNKKSTDDISCIVVKFQ 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01042 353 ProSitePatterns PPM-type phosphatase domain signature. 137 145 IPR000222 GO:0043169
Vian11g01042 353 PANTHER PROTEIN PHOSPHATASE 100 352 IPR015655 GO:0004722|GO:0006470
Vian11g01042 353 SUPERFAMILY PP2C-like 101 352 IPR036457 -
Vian11g01042 353 ProSiteProfiles PPM-type phosphatase domain profile. 105 352 IPR001932 -
Vian11g01042 353 Pfam Protein phosphatase 2C 118 345 IPR001932 -
Vian11g01042 353 SMART PP2C_4 95 350 IPR001932 -
Vian11g01042 353 Gene3D - 88 353 IPR036457 -
Vian11g01042 353 CDD PP2Cc 106 352 IPR001932 -
Vian11g01042 353 FunFam Probable protein phosphatase 2C 39 95 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01042 Vian-Chr11 14351426 14353735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01042 81 353 PP2C-type Phosphatase Gene Family AT3G15260 74.909 9.17e-155 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g01042 K17506 - gmx:100500617 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g01042 11 14351426 14353735 Vian11g01042 11 14351426 14353735 ECH