Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian11g01021 | ATGGGTGGCATGTGTTGCAAGCCCTCTGCCATTGAAGACAGTAAGGAGAGTCCAAGGGAGCGTTTATCGAGCAAGGCTGTGTCGGACTTGCGTGTATCTAGGGGAACTTCATCGAGGAGGGAGGAAGTTTTTAGGGTAAAAGATAGATATGATAACAATGAGGGAAGAACGGCATTGATTGATAAGCAAGGGAATGGTTCTGCTAGAGTGCAAGGTGATAGTATTGAAAGAAAGAGGGAGAAAATGGAATATGCTGTTGCTCCACATCCGGGGATTGGTAGTGTTCCCAAAGCCATGGAAGGTGAACAGGTTGCTGCTGGGTGGCCCTCATGGCTGGCAGCAGTGGCTGGAGAGGCTATCAGGGGATGGCTGCCACGGCGTGCAGATTCTTTTGAGAAGTTGGATAAAATTGGACAGGGAACTTATAGCAATGTTTATAGAGCTCGAGATCTTGAACAAAAGAAGATTGTTGCTCTGAAAAAAGTGAGGTTTGATAATCTTGAGCCTGAGAGTGTTCGCTTCATGGCAAGGGAAATTCACATTCTGCGCAGGCTTGATCATCCAAATGTCATAAAATTGGAAGGCTTGGTTACATCAAGGATGTCTTGCAGCTTATACCTTGTTTTTGAGTACATGGAGCATGACTTGGCTGGGCTTGCATCACATCCTGGACTGAAGTTTACTGAAGCTCAGGTTAAATGTTACATGCAGCAACTTTTACGTGGACTTGATCACTGCCACAGCTGTGGTGTACTGCACCGTGACATTAAGGGTTCTAATCTTTTGATTGACAACAATGGGATATTGAAAATTGCAGACTTTGGTTTGGCAAGCTTTTTTGATCCCAATCAAGCTCAGCCATTGACAAGCCGAGTTGTCACTCTTTGGTATAGGCCACCTGAGCTTTTGCTTGGAGCCACTTATTATGGCACTGCTGTAGACTTATGGAGTACAGGTTGCATACTTGCTGAGCTGTATGCTGGGAAGCCTATAATGCCTGGAAGAACTGAGGTGGAGCAATTACATAAAATTTTTAAACTTTGTGGTTCACCTTCTGAGGACTATTGGAGAAAATCAAAGTTGCCTCATGCAACAATATTTAAGCCTCAACAGCCCTATAGACGATGTGTTTCTGAAACATTCAAGGACTTTCCTACACCTGCAATAGACTTGATAGAGACTCTTTTGTCCATAGATCCTGCTGATCGTGGAACTTCAGCATCTGCTTTGATTAGTGAGTTCTTCTCAACAAAGCCTCTACCTTGTGATCCCTCAAGCTTACCAAAGTATCCTCCTAGCAAAGAATTTGATGCCAAGGTGCGGGATGAAGAAGCTAGAAGACAAGGAGGAGCAGGAGTCAAGGGCCAGAGGCATGATCTTGAGAGAAAAGGCACAAGAGAATCACGAGCAATTCCTGCACCTGATGCCAATGCTGAACTGGTCCTGTCAATGCAGAAGAGGCAAGGGCAGGCTAATTCTCAGAGCAGGAGTGAGAAGTTTAACCCTCATCCTGAAGAAGTTGCTTCTGGATTTCCCATCGACCCCCCTAGACCGTCACAAGCTGCAGGAGTGAGTGTGGATCCCCCTGTTCATCAACACAAAAGAGCTTCCCATTCAGGTCCATTGACACACCGTGCCGCATGGGCCAAAGCTGGGAAGAACCAGGAAGATGCTCCAAAGGTTTCAATGGGGGGCGACTTATCAACAATATCAGGCTTAGTTGCGGCAAGGAGGAGTATGCTCTCTGATGATCGCAGAGAAAGGTCTGGATCATCACAAGCAGATGCCCAAAAACTAATAAGCAGGTTCCCAGGATCCTTCAAGGAGGCCTCTGAGTCAATGACGCAACAGGATCAGAAAAATAATCATGCACATGCTCCTCAAAAGGAAGAAGGAAGAGCCAGCAGCAACAAAGACTCAAGTCTTGTTGGTTATGGCTCGAAGGGTCATAAAATTCATTATTCTGGGCCTCTGCTAGTTCCATCAAGCAACATGGATCAGATGTTGAAGGATCATGACCGGCAAATCCAAGAGGCGGTTCGAAGATCAAGATTAGACAAGGCAAAGATGAGAAGACTCCAAGCTGAGGGGAACCAGATAAGCAATTCATTATTTGTTTCTGGTCGTTGA | 2130 | 0.4573 | MGGMCCKPSAIEDSKESPRERLSSKAVSDLRVSRGTSSRREEVFRVKDRYDNNEGRTALIDKQGNGSARVQGDSIERKREKMEYAVAPHPGIGSVPKAMEGEQVAAGWPSWLAAVAGEAIRGWLPRRADSFEKLDKIGQGTYSNVYRARDLEQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFTEAQVKCYMQQLLRGLDHCHSCGVLHRDIKGSNLLIDNNGILKIADFGLASFFDPNQAQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYRRCVSETFKDFPTPAIDLIETLLSIDPADRGTSASALISEFFSTKPLPCDPSSLPKYPPSKEFDAKVRDEEARRQGGAGVKGQRHDLERKGTRESRAIPAPDANAELVLSMQKRQGQANSQSRSEKFNPHPEEVASGFPIDPPRPSQAAGVSVDPPVHQHKRASHSGPLTHRAAWAKAGKNQEDAPKVSMGGDLSTISGLVAARRSMLSDDRRERSGSSQADAQKLISRFPGSFKEASESMTQQDQKNNHAHAPQKEEGRASSNKDSSLVGYGSKGHKIHYSGPLLVPSSNMDQMLKDHDRQIQEAVRRSRLDKAKMRRLQAEGNQISNSLFVSGR | 709 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian11g01021 | 709 | CDD | STKc_CDK9_like | 131 | 415 | - | - | |
Vian11g01021 | 709 | MobiDBLite | consensus disorder prediction | 608 | 648 | - | - | |
Vian11g01021 | 709 | MobiDBLite | consensus disorder prediction | 483 | 498 | - | - | |
Vian11g01021 | 709 | FunFam | probable serine/threonine-protein kinase At1g54610 | 214 | 455 | - | - | |
Vian11g01021 | 709 | SUPERFAMILY | Protein kinase-like (PK-like) | 125 | 423 | IPR011009 | - | |
Vian11g01021 | 709 | ProSitePatterns | Protein kinases ATP-binding region signature. | 137 | 160 | IPR017441 | GO:0005524 | |
Vian11g01021 | 709 | Gene3D | Transferase(Phosphotransferase) domain 1 | 214 | 454 | - | - | |
Vian11g01021 | 709 | FunFam | probable serine/threonine-protein kinase At1g54610 | 118 | 213 | - | - | |
Vian11g01021 | 709 | MobiDBLite | consensus disorder prediction | 608 | 622 | - | - | |
Vian11g01021 | 709 | SMART | serkin_6 | 131 | 415 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian11g01021 | 709 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Vian11g01021 | 709 | MobiDBLite | consensus disorder prediction | 579 | 598 | - | - | |
Vian11g01021 | 709 | MobiDBLite | consensus disorder prediction | 434 | 469 | - | - | |
Vian11g01021 | 709 | ProSiteProfiles | Protein kinase domain profile. | 131 | 415 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian11g01021 | 709 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 251 | 263 | IPR008271 | GO:0004672|GO:0006468 | |
Vian11g01021 | 709 | Gene3D | Phosphorylase Kinase; domain 1 | 118 | 213 | - | - | |
Vian11g01021 | 709 | MobiDBLite | consensus disorder prediction | 12 | 27 | - | - | |
Vian11g01021 | 709 | MobiDBLite | consensus disorder prediction | 422 | 542 | - | - | |
Vian11g01021 | 709 | Pfam | Protein kinase domain | 131 | 415 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian11g01021 | 709 | PANTHER | CELL DIVISION PROTEIN KINASE | 129 | 421 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian11g01021 | Vian-Chr11 | 13645965 | 13651780 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian11g01021 | 123 | 472 | Core Cell Cycle Gene Families | AT5G10270 | 51.639 | 3.04e-119 | 365 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CDK-CRK7-CDK9 | Vian11g01021 | Pkinase | 1.5e-68 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian11g01021 | - | - | gmx:100792173 | 1346.26 |