Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00981 ATGGAGAGCACCGACTCCTCCACCGGGTCACAACAGCAGCCGCAATTGCCACCTGGCTTCCGCTTCCACCCCACCGACGAGGAGCTCGTCGTTCACTACCTCAAGAAAAAAGCAGCTTCCGTTCCTCTTCCCGTCGCCATAATCGCTGAGGTTGATCTCTACAAGTTCGATCCATGGGAGCTACCCGCTAAGGCCACGTTTGGGGAGCAGGAGTGGTACTTCTTTAGTCCGAGGGACAGGAAGTATCCGAACGGTGCGAGGCCAAACAGAGCGGCCACTTCTGGGTATTGGAAGGCCACTGGGACTGATAAGCCTGTGTTAACCTCTGGGGGAACCCAGAAGGTTGGAGTGAAAAAGGCTTTGGTTTTCTATGGAGGGAAGCCCCCAAGAGGAATCAAAACTAATTGGATCATGCATGAGTATAGGCTTGCTGATAACAAGCCTAACAATAGGCCTCCTGGCTGTGACTTGGGCAACAAGAAAAACTCTCTAAGGCTTGATGATTGGGTGCTGTGCCGAATCTACAAGAAGAGCAACACGCACAGGTCTCCCATGGAGCATGACAGGGAAGATTCAATGGAAGACATGATTGGAGGGATTCCTCCTTCGATCAACGTGGGTCACATGAGTGGGAGGTATCATCACCATCATCATCATCTTTCAAAGATGTCCACAGGCTACAGCAGTGCATTGTTGGAAAATGACCAGAACCTGTTGGAAGGGATGATGATAGGTAACGGATCAGTGATGAACACAAGTACGACTGGTACTACACCTGGTGCCATGGGGGCCTCAAACTCCAAGGCAGAGCTTTCTTTTGTGCCAACCATGACTCACTCTTCCAACACTTGTAAAAGAACACTCTCGTCGCTGTATTGGAATGATGAGGATTTGGCTGGCACCTCATCATCCAACAAGAGGTTGAATTTGGAAAGTGGGGACAACAATCACGGAAGTGTTGTGAGAACTGATCAAGATAATGGCACTGCCACCTCAATTGTCACTCTGCTTAACCAGCTCCCTCAAACCCCTTCATTGCACCAGCAATCTATGTTGGGATCCATAGGCGATGGTCTTCTTAGGACAACATATCAAATACCAGGAATGAATTGGTATGCTTAG 1122 0.4938 MESTDSSTGSQQQPQLPPGFRFHPTDEELVVHYLKKKAASVPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKSNTHRSPMEHDREDSMEDMIGGIPPSINVGHMSGRYHHHHHHLSKMSTGYSSALLENDQNLLEGMMIGNGSVMNTSTTGTTPGAMGASNSKAELSFVPTMTHSSNTCKRTLSSLYWNDEDLAGTSSSNKRLNLESGDNNHGSVVRTDQDNGTATSIVTLLNQLPQTPSLHQQSMLGSIGDGLLRTTYQIPGMNWYA 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00981 373 ProSiteProfiles NAC domain profile. 16 177 IPR003441 GO:0003677|GO:0006355
Vian11g00981 373 MobiDBLite consensus disorder prediction 1 21 - -
Vian11g00981 373 FunFam NAC transcription factor 56 25 182 - -
Vian11g00981 373 SUPERFAMILY NAC domain 10 177 IPR036093 GO:0003677|GO:0006355
Vian11g00981 373 PANTHER NAC TRANSCRIPTION FACTOR 56 16 224 - -
Vian11g00981 373 MobiDBLite consensus disorder prediction 302 326 - -
Vian11g00981 373 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Vian11g00981 373 MobiDBLite consensus disorder prediction 1 18 - -
Vian11g00981 373 Gene3D NAC domain 25 182 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00981 Vian-Chr11 12563367 12564997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00981 1 373 NAC Transcription Factor Family AT3G15510 54.124 2.48e-129 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vian11g00981 NAM 2.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00981 - - vra:106763825 759.599