Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00970 ATGAACGGTAAGGCTAACGTCACCAAAGAACTCAACGCTAAGCACAAGAAGCTCGCAAAATTAGGCACTGGTAGGTTTTGTTTTGATATGTTTGTCATGATTTTTGTTACTGATTGCTGGCAGATACTGGAAGGACTTCTTAAATTACCAGACAATAGAGAATGTGCTGACTGCAAAGCTAAGTATGTACTGGTGGATCTGAATGATCCGGTTCGTTCTGCAACCCTGGACACATGGCTTCCAGAGCAAGTTGCATTCATTCAATCAATGGGAAACGAGAAAGCAAATAACTACTGGGAAGCAGAATTACCACCAAATTATGATAGAGTTGGAATTGAGAATTTCATTCGTGCAAAGTATGACGAGAAGAGATGGATTCCAAGAGATGGGAATCCAAAAACACCTTCTGGATTGCGGGAAGAAAGAAGTCCTTCACATTGGCAGAGGCCTGGGGAGAGAAGTGGTCATAATGTTGTTTCTGAAAAAACTTTTGAGGGAAGGAAGAAATTCCAACCGTCAAATGCAATTCCTGCTACACGAAACAGTGTTCCTGCTCCTCCCAAAGCACCTGAGCAACCACAAGCTGAATCTTCAAAGCAGGCTATGGATGCAGCTCAAAATACCCCTCCAAAAGTTGACTATGCTACAGACCTTTTCAACATGTTGTCTATGGATGTCCCGAAAGAAAATGGCTCTGAGTCGGCCAGTACAACTACTGATGATAATCTCTGGGCAGCTGCTGCAGAGGTGTCAACAGCTGAGAAGACTAGTCCGCCGCCAAAAGTAGCTGATAATAGTGCTCTGCTGTCTGCAGCTGGTATTGAGGATCTTTTCAAAGAATCACCTATGATGCCAAGCTTAACTCCAGAAAAGCCACAGAAAGATGTTAAAAATGATATAATGAGCCTCTTTGAGAAGGGCAATATGGTGTCTCCATTTTCTATGCATCAGCAGCAGCTTGCCATGCTACAGCAACAGTCTCTTCTAATGGCTGCTGCAGCTAAATCTTCTGGTGGGGATCTCAAGTATCCTCCGGGCATACAAGAACCTAGACCAAATGTTCCTGTGCAAAGTTGGCCAGCTACTGGCTACTCGATTTCTGGAGCATTGCCCATGCAGGTGCAGATTACGAACATGACCCCAGCACATTTTGCTGGGAGCTCTGTACAATATCAACCATCTAGTTTCTATGGTATGGGGCAAGTTCCACCTCCAGTTAACGGTGTGATGGCGACAATGGGAGCCAGTAAACCCCAGTCAGGAGCTCCAGTGTCATCTAGTACTACACAGTCAGCGAAGGATTATGATTTTTCCTCCTTAACACAGGGGATGTTTGCGAAACACTGA 1347 0.4469 MNGKANVTKELNAKHKKLAKLGTGRFCFDMFVMIFVTDCWQILEGLLKLPDNRECADCKAKYVLVDLNDPVRSATLDTWLPEQVAFIQSMGNEKANNYWEAELPPNYDRVGIENFIRAKYDEKRWIPRDGNPKTPSGLREERSPSHWQRPGERSGHNVVSEKTFEGRKKFQPSNAIPATRNSVPAPPKAPEQPQAESSKQAMDAAQNTPPKVDYATDLFNMLSMDVPKENGSESASTTTDDNLWAAAAEVSTAEKTSPPPKVADNSALLSAAGIEDLFKESPMMPSLTPEKPQKDVKNDIMSLFEKGNMVSPFSMHQQQLAMLQQQSLLMAAAAKSSGGDLKYPPGIQEPRPNVPVQSWPATGYSISGALPMQVQITNMTPAHFAGSSVQYQPSSFYGMGQVPPPVNGVMATMGASKPQSGAPVSSSTTQSAKDYDFSSLTQGMFAKH 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00970 448 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 61 IPR044520 GO:0005096
Vian11g00970 448 MobiDBLite consensus disorder prediction 125 168 - -
Vian11g00970 448 MobiDBLite consensus disorder prediction 125 211 - -
Vian11g00970 448 Gene3D Arf GTPase activating protein 67 132 IPR038508 -
Vian11g00970 448 Pfam Putative GTPase activating protein for Arf 70 126 IPR001164 GO:0005096
Vian11g00970 448 SUPERFAMILY ArfGap/RecO-like zinc finger 41 127 IPR037278 -
Vian11g00970 448 SMART arf_gap_3 41 133 IPR001164 GO:0005096
Vian11g00970 448 MobiDBLite consensus disorder prediction 412 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00970 Vian-Chr11 12299654 12304499 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00970 43 126 C2H2 Transcription Factor Family AT4G05330 32.743 4.42e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00970 K12486 - gmx:100789910 591.652