Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00967 ATGGAAACCTTCGACGTTCCTCGATTTGGCAAATGCACCTCTGGAGTTTTCAAGATGATGTTATCAGCTACAATGTCTGCTCTATCGAGGAGTTCGCTGGAGGAGATGCTTGAGTCGCTTCGCAAGAGAGACGAGGAGGAGAGACCGAAGGACTTGCCGCCGGCATTGCCGTCGCGGCCGCAGTCGAGGGCGCGGTTGCCTCCGGCGAGGAGGTCGTTGCCTCATAACTTCAAGGTTGATGGCGATAATGATCAGAAGGGGCACAAAAGGAAGGGTAGTTTTGGGTCCAAGAAGGTCAAGTTGCGTGTGGAATCCCCTTATGCAGTCATATCAGAAGAGAAAGTGAGTGAACAACCATCATCTCCGGTTCCAACTGCGAATGATTCTTCTACTGATTGTGAAGCTCCTCCTCAGTCTGAGGAGTTGGAGGATGATAACGTTGCTTATTTCATAAAAAAGGGGAAGTTGATTGAAATTCATTTCAGCACAATGGGGAAAATTTGTGGTGCAAAAGTTCAAACTTTTCTGTTAGAAAAGTCAAGAGTTGTTCAACTTGCCTTGGAAAGACTGAATCTTAGGGCGGCTAGCGAATATAAATATCTTAACCAAAGTGACTGCACAACAATTGATGGTGTTGATGATGCTAAAAAGTTTAAAAGGCTGATGAAAGCATTGGATGTTATTCAAATGTGCAAAGAAGATCAAGAGCTAGTTTTTAAGATGCTGGCTGCGATATTATGGTTGGGAAATATAGCATTCCAAGATAGTGATAATGAAAATCACATTGAGGTGGTGAATGATGAAGCTGTAACGAATGCTGCTGTGCTAATGGGGTGCAGTTCTCAGGAGCTAATGACAGTGTTATCTACCCATAAAATCCAAGCTGGCAAGGATACTATTACCAAGAAATTGACCTTGCGGCAGGCAATTGATGCAAGAGATGCAATAGCAAAATTTATATATGCAAGCTTGTTTGACTGGCTTGTAGAACAAGTTAACAAGTCACTTCAAGTAGGTAAACGGTGTACTGGGAGATCTATAAGTATCCTTGATATTTATGGATTTGAGTCATTCCAGAATAACAGCTTTGAACAATTTTGTATAAACTACGCCAATGAGAGGCTTCAACAACATTTCAATCGGCATCTGTTTAAACTTGAGCAGGAGGACTATGAATTAGACGGTATTGATTGGACTAGAGTAGAGTTTGAGGACAACCAAGTGTGTTTGGATCTCTTTGAAAAGAAGCCTCTTGGGCTATTCTCTCTGTTGGACGAGGAATCTAATTTCCCCAAGGCCAGTGATCTAACACTAGCCAACAAACTTAAGCAGCACCTGCACTCTAATCCTTGCTTTAAAGGGGAAAGAGGCAGGGCTTTTAGTGTCTCTCATTATGCTGGGGAGGTTTTGTATGATACAAGTGGCTTCCTAGAAAAGAATAGAGATCCACTACCATCTGATTCCATTCAACTCCTGTCATCATGTAGCTGTGAACTGCTTCAGTTGTTCCCCAAGATGCTTAATCTGCCTCAGAAGCAATCAAATTACTCGCATGGAGGTGCTCTGGACTCAAAAAAGCAGAGTGTTGGCACTAAGTTCAAGGGTCAATTGTTCAAGTTGATGCATCAGCTGGAGAGCACCACACCTCACTTTATTCGCTGTATAAAGCCAAATACTAAGCAACTTCCTGGAATATATGAACAAGATCTTGTACTACAACAGCTCAAGTGTTGTGGAGTTTTGGAGGTTGTTAGGATTTCGAGGGCTGGATATCCTACTCGAATGACACATCAAGATTTTTCCAGAAGGTATGGGTTTCTGCTTGTTGAGGCGAACACATCTCAGGACCCATTGAGCATTTCGGTTGCGGTTTTGCAACAATTTAATATCCCTCCCGAAATGTACCAAGTTGGCTTCACCAAACTTTATCTTCGAACTGGGCAGATTGGGGCACTGGAGGACAGGAGAAAATATCTTTTGCAGGGACTACTTGGTATTCAAAAAAGTTTTCGTGGTTATCAAGCTCGCCGTCGTTACCATGAGCTGAAGAAGGGAGTGACTACTTTACAATCATTTGTTCGGGGAGAAATTGGAAGAAGGGAATATGGTGTTATGGTGAAGTCTTCTATGACTATTTCTTCTGAAAATGTTAAGGAGATGCTGGCAGCCACAACACTACAATCTGTAATTCGTGGATGGCTGGTTCGGAGGAATGCCAGTGACTTCAATAACTCAAAGAAAAGTCGTGAAAATGCAAGATCTAGGCGAAGGTCACGTGTGAAGATGCCCGAAGAAAAGGATGTGCCAAGTGATCGGCTCCCGAATCTACCTGCAGCTTTAGCTGAACTCCAGAGGCGGGTTGTCAAGGCTGAAGCTACCATAGAGCAAAAGGAAGGGGAAAATGCTGAATTGAAGGATCAGCTAAATCAGTTTGAGAGTAGATGGATTCAATACGAGAAAAGGATGAAATCAATGGAGGATATGTGGCAAAAACAAATGGCATCTTTGCAAACGAGCCTTGCTTCTGCTAGAAAGAGCCTTGCTTCTGAGAATGCCAACAGTCAACATGCAAGACGTGATGTATCATCACCTTTACCCTATGATTCAGAAGATGCTATTTCCATGGGATCTCGAACACCTAGTGTAAGCACACCTTTGAAGTATTCTGCTAGCATTTCTGAATCTGCACTAGGGAGAGATGGTCATGGTGCTTTGGCTTCAGTGGGCCACCTTGCTAGGGAATTTGATCACCGTAGACAGACCTTTGATTATGATGCCAGAAATCTGGTTGAGCTTAGAGCAGGTCAATCTGCTAACACAAATTCCGTTGAAGAACTTCGGAAACTCAAACATAGGTTTGAGGTGTGGAAGAAAGACTACAAGGTTAGATTAAAAGAAACAAAAGCAAGACTTCAAAAGGTAGGGAATTCAGAAATGGATAAAAGGCGGAGATGGTGGGGGAAACTGAGTTCCAGAGCACTATAG 2985 0.4305 METFDVPRFGKCTSGVFKMMLSATMSALSRSSLEEMLESLRKRDEEERPKDLPPALPSRPQSRARLPPARRSLPHNFKVDGDNDQKGHKRKGSFGSKKVKLRVESPYAVISEEKVSEQPSSPVPTANDSSTDCEAPPQSEELEDDNVAYFIKKGKLIEIHFSTMGKICGAKVQTFLLEKSRVVQLALERLNLRAASEYKYLNQSDCTTIDGVDDAKKFKRLMKALDVIQMCKEDQELVFKMLAAILWLGNIAFQDSDNENHIEVVNDEAVTNAAVLMGCSSQELMTVLSTHKIQAGKDTITKKLTLRQAIDARDAIAKFIYASLFDWLVEQVNKSLQVGKRCTGRSISILDIYGFESFQNNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGIDWTRVEFEDNQVCLDLFEKKPLGLFSLLDEESNFPKASDLTLANKLKQHLHSNPCFKGERGRAFSVSHYAGEVLYDTSGFLEKNRDPLPSDSIQLLSSCSCELLQLFPKMLNLPQKQSNYSHGGALDSKKQSVGTKFKGQLFKLMHQLESTTPHFIRCIKPNTKQLPGIYEQDLVLQQLKCCGVLEVVRISRAGYPTRMTHQDFSRRYGFLLVEANTSQDPLSISVAVLQQFNIPPEMYQVGFTKLYLRTGQIGALEDRRKYLLQGLLGIQKSFRGYQARRRYHELKKGVTTLQSFVRGEIGRREYGVMVKSSMTISSENVKEMLAATTLQSVIRGWLVRRNASDFNNSKKSRENARSRRRSRVKMPEEKDVPSDRLPNLPAALAELQRRVVKAEATIEQKEGENAELKDQLNQFESRWIQYEKRMKSMEDMWQKQMASLQTSLASARKSLASENANSQHARRDVSSPLPYDSEDAISMGSRTPSVSTPLKYSASISESALGRDGHGALASVGHLAREFDHRRQTFDYDARNLVELRAGQSANTNSVEELRKLKHRFEVWKKDYKVRLKETKARLQKVGNSEMDKRRRWWGKLSSRAL 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00967 994 MobiDBLite consensus disorder prediction 743 773 - -
Vian11g00967 994 MobiDBLite consensus disorder prediction 75 90 - -
Vian11g00967 994 MobiDBLite consensus disorder prediction 37 53 - -
Vian11g00967 994 Gene3D - 664 710 - -
Vian11g00967 994 MobiDBLite consensus disorder prediction 757 771 - -
Vian11g00967 994 PANTHER MYOSIN 153 981 - -
Vian11g00967 994 Gene3D - 590 658 - -
Vian11g00967 994 ProSiteProfiles Myosin motor domain profile. 1 657 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian11g00967 994 MobiDBLite consensus disorder prediction 114 136 - -
Vian11g00967 994 ProSiteProfiles IQ motif profile. 659 688 IPR000048 GO:0005515
Vian11g00967 994 ProSiteProfiles IQ motif profile. 682 711 IPR000048 GO:0005515
Vian11g00967 994 Gene3D Kinesin motor domain 154 586 IPR036961 -
Vian11g00967 994 ProSiteProfiles IQ motif profile. 719 748 IPR000048 GO:0005515
Vian11g00967 994 MobiDBLite consensus disorder prediction 37 96 - -
Vian11g00967 994 MobiDBLite consensus disorder prediction 840 885 - -
Vian11g00967 994 FunFam Myosin IE heavy chain 227 335 - -
Vian11g00967 994 Pfam IQ calmodulin-binding motif 722 738 IPR000048 GO:0005515
Vian11g00967 994 Pfam IQ calmodulin-binding motif 666 680 IPR000048 GO:0005515
Vian11g00967 994 MobiDBLite consensus disorder prediction 110 141 - -
Vian11g00967 994 MobiDBLite consensus disorder prediction 840 860 - -
Vian11g00967 994 Pfam Myosin head (motor domain) 187 645 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian11g00967 994 FunFam Unconventional myosin-XIX 358 547 - -
Vian11g00967 994 SMART iq_5 718 740 IPR000048 GO:0005515
Vian11g00967 994 SMART iq_5 681 703 IPR000048 GO:0005515
Vian11g00967 994 SMART iq_5 658 680 IPR000048 GO:0005515
Vian11g00967 994 Gene3D - 356 547 - -
Vian11g00967 994 Coils Coil 780 821 - -
Vian11g00967 994 Gene3D - 187 229 - -
Vian11g00967 994 Gene3D Myosin VI head, motor domain, U50 subdomain 231 525 - -
Vian11g00967 994 SMART MYSc_2a 14 658 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian11g00967 994 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 706 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00967 Vian-Chr11 12174376 12184492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00967 154 988 Myosins gene family AT5G54280 61.130 0.0 1077
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00967 K10357 - gmx:100801876 1406.35